Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00167 ATGCCAAACCCAACCATGCATCATCTCCTTCTCCGCTTCCTCTTCCTCTTCTCCGCCCTCGCAACCCCCTCTTCCGCCGCCATCGACACCTTCATCTTCGGCGGTTGCTCCCAGCCCAAGTACACGCCGGGTTCGCCCTACGAGAGCACCGTCAACTCGCTCCTCACCTCGCTCATCAGCTCGGCTTCGTTCGCCAACTACAACAACTTCACCCTTGCCGCCGCCTCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCAACAACGACCAGTGCTCGCGCTGCGTGGCGCGTGCGGTCACCCAGCTCGGCACGCTCTGCTACGCCTCCTGCGGCGGCGCGTTGCAGCTCGAGGGCTGTTTCGTGAAGTACGACAATGCGACGTTCGTCGGGGTGGAGGACAAGACGGTTGTGACCAAGAAATGTGGGCCGTCCGTTGGGTTGACCTCGGACGCGTTGACTCGGAGGGACGCTGTGCTGGCGTATTTGCAGACTCCCGATGGGACTTCCAAGACGTTCAGAACCAGTGGGTATGGGGATTTTCAGGGTGTGGCGCAGTGCACCGGAGACTTGAGTCCCACCGAGTGCCAGGATTGTCTCTCTGCTGCCATCCAACGGCTCAAAACCGACTGTGGGCCCTCCCCCTGGGCAGAGATGTACCTCGCCAAATGCTACGCGCGCTACTCCCAGGGTGGCTCCCACTCGCGCCCTAATAATAACGATGACAGCAACCACAACGATGATGAGATTGAGAAGACACTCGCTATACTAATTGGACTCATTGCCGGGGTTGCTCTGATCATCGTTTTCCTTTCTTTCTTGTCCAAAGTGTGCGAAAAGCAGAAAGGTGGTAAATAA 867 0.5871 MPNPTMHHLLLRFLFLFSALATPSSAAIDTFIFGGCSQPKYTPGSPYESTVNSLLTSLISSASFANYNNFTLAAASSDTVYGLFQCRGDLNNDQCSRCVARAVTQLGTLCYASCGGALQLEGCFVKYDNATFVGVEDKTVVTKKCGPSVGLTSDALTRRDAVLAYLQTPDGTSKTFRTSGYGDFQGVAQCTGDLSPTECQDCLSAAIQRLKTDCGPSPWAEMYLAKCYARYSQGGSHSRPNNNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKQKGGK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00167 288 FunFam Cysteine-rich repeat secretory protein 60 153 234 - -
Viun3g00167 288 Gene3D - 153 234 IPR038408 -
Viun3g00167 288 Gene3D - 28 132 IPR038408 -
Viun3g00167 288 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 281 - -
Viun3g00167 288 ProSiteProfiles Gnk2-homologous domain profile. 137 236 IPR002902 -
Viun3g00167 288 Pfam Salt stress response/antifungal 162 233 IPR002902 -
Viun3g00167 288 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Viun3g00167 288 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Viun3g00167 288 FunFam cysteine-rich repeat secretory protein 3 28 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00167 Viun-Chr3 897052 899518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00167 14 231 Receptor kinase-like Gene Family AT4G05200 26.840 1.08e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00167 3 897052 899518 Viun3g00167 3 897052 899518 ECH