Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00132 ATGAGCCGGCCAATGGAGGAAGATACTGCGGCTAAGAATGAGGAAGAGGAGTTCAACACTGGACCACTATCTGTACTGATGATGAGTGTTAAAAACAATACCCAGGTATTGATAAATTGTCGGAACAACAAAAAACTTCTGGGTCGTGTTAGAGCTTTTGATAGGCACTGCAACATGGTTCTTGAAAATGTCAGGGAGATGTGGACTGAGGTGCCCAAGACTGGTAAAGGAAAGAAAAAGGCCCAGCCAGTGAACAAGGATAGATTCATCAGCAAAATGTTCCTACGTGGAGATTCAGTCATCATTGTTCTTAGGAACCCCAAATGA 327 0.4343 MSRPMEEDTAAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00132 108 Gene3D - 16 108 - -
Viun3g00132 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 2 108 IPR027248 GO:0008380|GO:0030532
Viun3g00132 108 Pfam LSM domain 29 103 IPR001163 -
Viun3g00132 108 ProSiteProfiles Sm domain profile. 23 108 IPR047575 GO:0003723
Viun3g00132 108 CDD Sm_D2 18 107 IPR027248 GO:0008380|GO:0030532
Viun3g00132 108 SUPERFAMILY Sm-like ribonucleoproteins 21 106 IPR010920 -
Viun3g00132 108 SMART Sm3 26 105 IPR001163 -
Viun3g00132 108 FunFam Small nuclear ribonucleoprotein Sm D2 16 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00132 Viun-Chr3 657518 660537 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00132 3 657518 660537 Viun3g00132 3 657518 660537 ECH