Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00125 ATGTCTCTTCCACCCATAGAGTGTGTATACGTAACAGAGGAGTGTGTTCGCGAATGGAGGAGTGGCAACCCTGTCCTCAAGGTCTCCCAAGCTGTTCCCATGCTGCGCTTCCTCTACGAGCTCTGTTGGACTATGGTTAGGGGTGAACTGCCCTTTCCCAAGTGTAAAGTTGCATTGGATTCTGTCATATTTTCAGAACAAGCTTCCAATGACAAAATAGCTTCGAATTTTGCTGATATAGTGACCCAGATGGCTCAAGATCATACAATGCCAGGAGATTCCCGTTCTCGTCTCATCAAGCTGGCAAGATGGCTTGTGGAATCTGAAATGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAATTCTTGGGGGAAGCTGAATTGATCAAAATTAAGGCTCAGGAGTTGAAGGGTAAAGAGGTCAGAGTTAATACCCGACTTCTCTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGCGAGGGCTATGCAAAGCTGGTGACTCTCCTTTGCCGGGACTCTGAAGCAACTACACAAAAATCATCTGCAGCAACCATTGGCATTATTAAGTCATTAATTGGCCATTTTGATTTGGATCCAAATCGCGTTTTTGATATTGTCTTGGAGTGTTTTGAACTGCAGCCTGATGATGATGTGTTTATAGAGTTGATTCCTATATTTCCAAAGTCTCATGCGTCACAGATTCTTGGGTTTAAATTTCAATATTATCAACGCATGGAAGTTGGCAATTCTGTTCCATTTGGGCTCTATAGACTCACAGCCTTGCTGGTGAAGCAAGATTTTATTGATCTTGATAGCATATACGCTCATCTACTTCCCAGAGATGATGAGGCATTTGAGCATTACAATACTTTCTCTTCCAAGCGACTTGATGAGGCTAATAAAATTGGAAGAATAAACCTTGCTGCGACTGGAAAAGATCTAATGGATGACGAGAAACAGGGGGATGTCAGTATAGATCTCTTTGCTGCCTTAGACCTTGAAACAGAAGCAACTGAAGAGCGGACAACTGAGCTTCAAACCAGTCAGACTTTGGGCTTGCTCACTGGCTTTCTTTCGGTGGATGACTGGTATCATGCACATCTATTATTTGACCGCCTTTCACCACTCAATGCTGTGGAACATATTCAAATATGTGACAGTTTGTTCAGGCTTATTGAGAAGTCCATTTGTTCAGCATATGATGTTGTTCGTCAGACACATCTTCAAAATCCTGGATCATCGTCAGGAGGCACTGATGTTATGGATGTTGATAACTCTTCAGGATACAATTCTTTCATAGATCTTCCTAAGGAACTTTTTCAGATGCTTTCTTGTACTGGACCTTATCTCTACCGTGATACAGTACTGTTGCAGAAGGTTTGTAGGGTCTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTAAGTCGTGGCAATGGTGCCTTGACTCCTCAATTACATGTTCCTGGAAACCCTAACTTACATCTTAAGGAGGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCATGTGTACTTCCTTCTTTGCAGTTAATTCCTGCCAATCCTGCTGTTGGCCAGGAGATATGGGAACTAATGAGTCTTCTTCCTTACGAGGTGCGATATCGATTGTATGGTGAATGGGAAAAAGATGATGAGCGCATTCCTATGCTCTTAGCTGCAAGACAAACTGCTAAGTTGGACACTAGACGTATTTTGAAAAGGCTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCAATGACTGTCCTCCGAACCATTGTTCATCAGATTGAGGCTTACAGAGACATGATTACTCCTGTAGTGGATGCCTTTAAGTACTTGACTCAGCTTGAGTATGATATATTGGAATATGTTGTGATTGAGCGCTTAGCACTTGGTGGACGTGATAAGTTAAAGGACGATGGCCTTAATTTGTCAGACTGGCTTCAATCTCTAGCCTCATTTTGGGGCCATCTGTGTAAGAAGTACCCATCAATGGAATTACGGGGCCTCTTCCAGTATCTTGTGAATCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACAGAGAACTTGACAGAGGAACAGCTTGATGCAATGGCAGGGAGTGACACTCTCAGATATCAAGCAACTTCTTTTGGTGTAACTCGGAATAATAAGGCATTGATAAAGTCAACTAGCAGACTTAGAGACGCATTACTTCCAAAAGATGAACCAAAGTTGGCAATCCCACTGTTACTACTTCTTGCTCAACATCGATCTCTAGCTGTCGTAAATGCAGATGCACCGTACATTAAGATGGTTAGCGAGCAGTTTGATAGATGTCATGGAACTCTCCTTCAATATGTGGAATTTCTTGGCAGTGCAGTCACCCCATCATCAAATTATGGCATTCTTATTCCGTCCCTCAATGACCTGGTCCACCTTTACCACCTGGACCCCGAGGTTGCTTTCTTGATATATCGTCCCATAATGAGGCTTTTCAAGTCTATGAGAGATCCTGATATTTACTGGCCGTTGGATGATAAACATGCTGCTAGTGATACATCTTCCAACTTTGAGTCTGATCCTGTGGATAATTCCGGCAGTATGGTTCTAAATCTTGGCTCTGCCCAAAATCCTATAAGTTGGTCTTATCTTCTTGATACTGTTAAAACCATGTTACCTCCAAAAGCATGGAATAGCTTATCTCCCGATCTTTATGCAACATTTTGGGGTCTTACGTTATATGATCTGTATGTCCCAAAAAATCGATACGAGTCAGAAATAGGCAAGCTGCATGCAAATCTTAAATCATTGGAGGAGCTTTCTGACAATTCGAGCTCAGCAATTACAAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGGCTGATTAGTGAACTGCATAAACACGAGGAAAATGTTGCATCTGTTCATAGACGTCTTTCTCATGAAAAAGACAGATGGTTAAGTTCCTGTCCTGACACCTTGAAGATCAACATGGAGTTTCTTCAGCGCTGTATTTTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTCCACACACTTCATTCCCTTGGAACCCCCTTTTTTAACACAGTCAATCATATAGATGTTTTGATTTGTAAGACCCTACAACCTATGATATGCTGCTGCACTGAATACGAGGCAGGCAGGCTTGGTAGGTTTCTGTATGAGACTTTGAAGATCGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCAGGCTTTGCCGTTTACTATAGATATCCAAATAGTCAACGAGTTACATATGGGCAGTTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACACGTTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTTATAATGTTGACAAAAATTTCTAGTGTTTTCCCTGTTACCCGGAAGAGTGGGATAAACCTTGAGAAGCGAGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTTGCAGCAGCATTGGCTGCTAGGAAGCCTTCTTGGGTTACTGATGAAGAATTTGGTATGGGTTATCTTGAGTTGAAACCTGCACCAGCTGTAACTAAATCTTCAGCTGGAAATTCAGCAACTGTGCATAGTGGGATGAATCTCAATGTTTCACAAACTGAATCTGCCAGTGGAAAACATGTGGACTCTGGAAACACAGCCAAAGATCAGGTAATAAGAACAAAAACTGCAGATGGCAAGTCTGAAAGAACTGAAAGCATGACTGTGACAAAATCTGATTCTGGCCATACAAAAGTCAAGAGTGGTTCAATGATAAATGGATTAGATGCCCAAACCTCCTCGACCTTATCTATACAGTCTGGGGTGTCAAAGTCTATGGAAAACTCAAAGCAAGTGGAAGAATCGATAAATAGACCATCAGATGAACATGGAACAAGAACTGCTGAGTCAAGAGCTTCAGGAAAGCGTTCGGTGCCTACTGGTTCACTTTCAAAACCATCAAAACAAGACCCTGTTAAAGAAGACAGTAGGTCTGGAAAACCTGTTGGTAGAACTTCAGGTTCCTTGAGCAGTGACAAGGATCTACAAACCCATGCATTGGAGGGAAGACACAGTGGAACTACCAATGTAACTTCTTTAGTCAGTGCCAATGGTAACACCATTACAGGTTCTACTAAAGGTTCAAACCCACCAGTAAGAATTTCATTGGATGGTCCTGGTAATGAATCAAAGGCTGAGATTGGAGTTGCTAAGTCTTCTGATATTAGAGCATCTGTGGTAAAGGACGAAGGAAACGATACTACTGATTTCACTAGAGGATCCTCTTCTCGCGTAGTTCATTCCCCCAGGCATGAAAACACAGGAGTCACTTCAAAATCAAATGAAAAAGTTCAGAAGAGAGCCAGTTCTGCTGAAGAACCGGACAGACTAGGTAAACGACGAAAAGGAGATGTTGAGGCAAGAGATTTTGAAAGTGAAGTTCGATTCTCTGAAAGAGATAAGTTGATGGATCCTCGCTTTGCTGATGACAAATTGGGACCAGAGGAACATGGTCTGTACAGGGCAGGTGATAAGTCACTGGAACGGCCAAAAGACAAGGGCAATGAAAGATATGAGAGGGACCACAGGGAAAGATTAGACCGTATGGACAAGTCTCGGGGTGATGACTCTGTAGCAGAAAAACCTAGGGATAGGTCCATTGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGGGTAGTGAGAGGAGTTTTAATAGACTCCCTGAGAAAGCTAAGGATGAAAGAAGCAAGGATGATAGAAATAAGTTACGTTACAGTGATGCATCAGTAGAAAAATCACATGCTGATGATCGCTTCCATGGTCAAAACTTGCCTCCACCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTTTGGGAGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACGAGGCACTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAGGAACGGAGACGATCAGAAGAGACTGTGGTTTCTCAGGATGATTCAAAACGCAGAAAAGAAGATGATTTTCGAGAACGAAAACGTGAAGAAATTAAGGTTGAAGAGAGGGAGAGAGAAAGAGAGAAAGCTAATGTTCTAAAGGAAGACTTGGATTTAAATGCCGCATCCAAGAGACGAAAACTTAAGAGGGAGCATCTAGCGACTGGTGAGCCTGGGGAGTACTCACCTGTGGCTCCTCCACCTCCTCCCCCTGGTATTGGTATGTCACTGGGGTATGATGGAAGGGATAGGGGAGACAGAAAGGGGCCCGTCATCCAGCATCCAAACTACATAGATGAACCAAATATCAGGATTCACGGTAAAGAGGTGGCTAGCAAGTTGAATCGCCGTGATTCAGACCCCTTGTATGATCGTGAATGGGATGATGAGAAGAGACAAAGAGCTGACCAAAAGCGGAGGCACCGGAAGTAG 5616 0.4277 MSLPPIECVYVTEECVREWRSGNPVLKVSQAVPMLRFLYELCWTMVRGELPFPKCKVALDSVIFSEQASNDKIASNFADIVTQMAQDHTMPGDSRSRLIKLARWLVESEMVPVRLLQERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEATTQKSSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILGFKFQYYQRMEVGNSVPFGLYRLTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKQGDVSIDLFAALDLETEATEERTTELQTSQTLGLLTGFLSVDDWYHAHLLFDRLSPLNAVEHIQICDSLFRLIEKSICSAYDVVRQTHLQNPGSSSGGTDVMDVDNSSGYNSFIDLPKELFQMLSCTGPYLYRDTVLLQKVCRVLRGYYLSALELVSRGNGALTPQLHVPGNPNLHLKEARLRVEDALGACVLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLLAQHRSLAVVNADAPYIKMVSEQFDRCHGTLLQYVEFLGSAVTPSSNYGILIPSLNDLVHLYHLDPEVAFLIYRPIMRLFKSMRDPDIYWPLDDKHAASDTSSNFESDPVDNSGSMVLNLGSAQNPISWSYLLDTVKTMLPPKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIGKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKDRWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPAVTKSSAGNSATVHSGMNLNVSQTESASGKHVDSGNTAKDQVIRTKTADGKSERTESMTVTKSDSGHTKVKSGSMINGLDAQTSSTLSIQSGVSKSMENSKQVEESINRPSDEHGTRTAESRASGKRSVPTGSLSKPSKQDPVKEDSRSGKPVGRTSGSLSSDKDLQTHALEGRHSGTTNVTSLVSANGNTITGSTKGSNPPVRISLDGPGNESKAEIGVAKSSDIRASVVKDEGNDTTDFTRGSSSRVVHSPRHENTGVTSKSNEKVQKRASSAEEPDRLGKRRKGDVEARDFESEVRFSERDKLMDPRFADDKLGPEEHGLYRAGDKSLERPKDKGNERYERDHRERLDRMDKSRGDDSVAEKPRDRSIERYGRERSVERMQERGSERSFNRLPEKAKDERSKDDRNKLRYSDASVEKSHADDRFHGQNLPPPPPLPPNMVPQSLGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDSKRRKEDDFRERKREEIKVEEREREREKANVLKEDLDLNAASKRRKLKREHLATGEPGEYSPVAPPPPPPGIGMSLGYDGRDRGDRKGPVIQHPNYIDEPNIRIHGKEVASKLNRRDSDPLYDREWDDEKRQRADQKRRHRK 1871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1262 1282 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1344 1360 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1391 1441 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1262 1871 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1689 1784 - -
Viun3g00125 1871 Pfam THO complex subunit 2 N-terminus 36 415 IPR032302 -
Viun3g00125 1871 Pfam THO complex subunit 2 N-terminus 434 589 IPR032302 -
Viun3g00125 1871 Pfam Transcription factor/nuclear export subunit protein 2 920 1214 IPR021418 -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1508 1666 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1283 1299 - -
Viun3g00125 1871 Coils Coil 943 963 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1829 1863 - -
Viun3g00125 1871 Coils Coil 1739 1768 - -
Viun3g00125 1871 PANTHER THO2 PROTEIN 7 1774 IPR040007 GO:0000347|GO:0006397|GO:0006406
Viun3g00125 1871 Coils Coil 971 1005 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1479 1507 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1361 1377 - -
Viun3g00125 1871 MobiDBLite consensus disorder prediction 1300 1343 - -
Viun3g00125 1871 Pfam Transcription- and export-related complex subunit 591 666 IPR021726 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00125 3 598111 624963 Viun3g00125 3 598111 624963 ECH