Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00362 ATGGAGAGGGATTTTATGGGTCTGAACTCGAAGGAACCGTTCGTTGAAGTGAAGGAAGGGATGAATAATGATTGTGGGTGCAAAAACTCAGGTTTCACAAAAGGAGGAATGGTAAAATGGCCCTTTATGAACAAAGTACCTGTCCATCCTCATTTGATGTCCTTGAATACTCCTCAGATCAGATCAGATGACTCCACTGCGTTCAGATTGAAATCTGTGAATCATGATGGACAAGGTGGTGGCATTCATTTTTCCCTGACACCTTATCCTGCACTACATGATGTGAATTATATGAACCGCCCTCATAATGTGAAGATGTTTCCATCCCTAAAGAGTCCTTTTGCAACTGTTGCTCAGAATATGAATGCTTCTGGTATGAAGCAACCACTACTAGGTGGAATACCTGTTACAGCACCCCATTCATGTGTGAAACCATGTGTATCTACTCCTAAACTTACCATCTTCTATGCTGGCACCGTGAATGTGTTTGATGATATCACTCCTGAGAAGGCTAAAGCAATCATGTTGATGGCTAGGAATGGCATATCAGTTGCTTCTAATGTGACAGTGCCTAATAATGTTGAGGCAGCCAGACATAGTAAACCCATACCACTCTCAAGTCCTTTATCTGTTTCTTCACATAGTGGTGCAAAATCAGGGAGTGTTTCAAGTAGCAGTGATGAATTTCTGACACCTAAAACTTTTGTTAACAAAGCAGACACTCCTAAAGCAGTCAACACAAACACCATGCTACCATCAGCTGTGCCACAAGCTCGCAAGGCATCACTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGTTGAGTGCAGCACCATATAACCTGAACAAGAAGTGTGAGAATATGTCAGAAGAGAGTGCAAGTGAGGGTGCTGATGCAGTATAA 906 0.4272 MERDFMGLNSKEPFVEVKEGMNNDCGCKNSGFTKGGMVKWPFMNKVPVHPHLMSLNTPQIRSDDSTAFRLKSVNHDGQGGGIHFSLTPYPALHDVNYMNRPHNVKMFPSLKSPFATVAQNMNASGMKQPLLGGIPVTAPHSCVKPCVSTPKLTIFYAGTVNVFDDITPEKAKAIMLMARNGISVASNVTVPNNVEAARHSKPIPLSSPLSVSSHSGAKSGSVSSSSDEFLTPKTFVNKADTPKAVNTNTMLPSAVPQARKASLARFLEKRKERVLSAAPYNLNKKCENMSEESASEGADAV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00362 301 MobiDBLite consensus disorder prediction 277 301 - -
Viun2g00362 301 MobiDBLite consensus disorder prediction 199 227 - -
Viun2g00362 301 Pfam Jas motif 256 280 IPR018467 -
Viun2g00362 301 MobiDBLite consensus disorder prediction 205 227 - -
Viun2g00362 301 ProSiteProfiles Tify domain profile. 145 180 IPR010399 -
Viun2g00362 301 SMART tify_2 145 180 IPR010399 -
Viun2g00362 301 Pfam tify domain 149 178 IPR010399 -
Viun2g00362 301 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 118 290 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00362 Viun-Chr2 7404622 7407507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00362 121 296 Tify Gene Family AT3G17860 39.151 5.88e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun2g00362 tify 7.2e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00362 2 7404622 7407507 Viun2g00362 2 7404622 7407507 ECH