Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00324 ATGGATCAACAGAGAAATTTTGCACTTACCGAGATGAGAAAATCCGTTGAGAAGCTTGGTTCTTCTGCAGAGGGGTACGGAGACCACACACTGATTAGGTTTTTGATTGCTCGATCAATGGAAGTGGAAAAAGCTGCAAAAATGTTTGTGCAGTGGCAAAAGTGGAGGAGTGCTATGGTTCCTAATGGATTCATTTCAGAATCTGAAATTCCAGATGAACTGGAAGCAAGGAAAATCTTCTTGCAGGGTTTGTCTGGAGATAAATTTCCTCTCATGATTGTTCAAACCAACAGACATTTTCCTTCCAAGGATCAGATTCAATTCAAGAAATATGTCATATATATACTGGACAAGACAATTGCAAGTGCTTTCAAAGGAAGGGAGGTAGGGAATGAGAAGTTGATTGGGATTATTGATCTACAAAACATTTCATATAAAAATATTGATGCACGTGGCTTGATCACAGGATTTCAATTTTTACAGAGTTACTACCCTGAACGTTTGGCAAAGTGCTATATTTTGCACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTCGTTTCCTAGAGAAAGCTACCCTAGAAAAGGTTGTAATTGTGACCAATGAGGATGAGACGAGAGAGTTTGTAAGAGAGGTTGGTGAAGAGGTTCTTCCAGAAGTATATGGTGGAAAAGCCAAGCTTGTAGCAATCCAAGATGCTGAATTGGAACCACTGCAAAATGGATCAAACTGA 741 0.3927 MDQQRNFALTEMRKSVEKLGSSAEGYGDHTLIRFLIARSMEVEKAAKMFVQWQKWRSAMVPNGFISESEIPDELEARKIFLQGLSGDKFPLMIVQTNRHFPSKDQIQFKKYVIYILDKTIASAFKGREVGNEKLIGIIDLQNISYKNIDARGLITGFQFLQSYYPERLAKCYILHMPWFFVSVWKLVSRFLEKATLEKVVIVTNEDETREFVREVGEEVLPEVYGGKAKLVAIQDAELEPLQNGSN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00324 246 PANTHER OS03G0850700 PROTEIN 4 235 - -
Viun2g00324 246 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Viun2g00324 246 Pfam CRAL/TRIO domain 83 226 IPR001251 -
Viun2g00324 246 CDD SEC14 71 227 IPR001251 -
Viun2g00324 246 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Viun2g00324 246 Gene3D - 1 239 IPR036865 -
Viun2g00324 246 SUPERFAMILY CRAL/TRIO N-terminal domain 3 65 IPR036273 -
Viun2g00324 246 SMART sec14_4 73 229 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00324 Viun-Chr2 6405926 6412267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00324 24 222 Acyl Lipid Metabolism Gene Families AT1G55840 22.066 4.07e-13 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00324 2 6405926 6412267 Viun2g00324 2 6405926 6412267 ECH