Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00322 ATGTGCAAGACAATTCGAATGCATGGATTCCCAGCTAAAGTTTCAGCTGAAGAGGTGAGGAAATTTTTGGAACAAAATACAGGCCCTCAAAGTGTTCATGCTGTAGAGGTTGAGCAGCTCAAAGATGAAGATCCTACCACACATGTTAAGGTTAAATTTACAAACACAAAAAGTGTTGAAACAATCTTGGTCTTAGTTACTCAACACCTATCATACGGTGACCATGTTTTAAATGCTACAGAAATAGAACTTGACCTTTTGCCAAAGCAGAGAAACTTTTCTCACAGCATGGATGACATAGCAGTGCACTTTGGATGTCAAACATCCAAGAACAAACTTAGTGTACTCTGGGAACATCCAAGCGCTTCAGTCAAATTCGGGTCCAGACTGAGAAAGATGTATATATTTTTCCATTATTTGTTAGTGGATTATAAGCTGCAGATTTCTTCTGAGAGTATGTCACGTATTGAGCTGCATCACTCACATGATTTAACCAAGAAGCTTCTCCTTTTCCAGTTACGCAACGCTCCTCTGATCTATGAGAAAGATGTATCCAAAAGCAAATATTTTAAGGAGGCTAGTGACAACCATTGGTTTCGAGGAGTAGATTTCACCCCATCATGCAGCATCGGACAATCTTCTACTTTATGTTTTGAGCTTCCAAAAAGTGTTGAAGTCCCAAAGTTCAATCAGCACTATCGTAATTATAATGAAGTTGACGACAGTGTCTTTACTCTTGAGAGAAAACACCTTGGTTTCTCTTCTAACTTGAATTTTGTCCCCATTGTGATCCCTCCAGAAGGCTTCAACTTGCCATACAAAATTTTGTTCAAAATCAACTCACTAATTCAGCATGGATGTCTTCCTGTTCTGGCAATTGACATCGATTTTTTTCAACTGGTTGACCCTGGAAAAGTAAAGCTTGAATATATAGAAAGTGCCCTGCACAGATTAGATCAAATAAAAGTATGCTGCTATGAACCTGCACGATGGTTGGAGAAACAGTATAAGAAATACTCAGAAAATAGTCTACTTCCAATAATTAGTGCTATATCTTTGGATGATGGGTTGGTCTATGTGCACAGAGTGCAAGTAACTCCATCCAAAATATATTTCTGTGGACCTGAAGTGAACCTTTCTAACCGGGTTTTGCGCAACTATCCTGAAGACACTGATAACTTTCTTCGTGTTTCCTTCCTTGATGAAGACATGGATAAACTTCACTCATCAGATTTGGTGCCACGTTCATCTTCTGCGGACATGGACAGAGAAACAAAGCTTCATGAGAGGGTGCTGGCAACACTTAAAAATGGCATAGAAATTGGTGATAAGAAATTTGAGTTTCTTGCATTCTCACCAAGTCAATTGCGGGATAACTCTGTGTGGATGGTTGCATCAAGAGCTGGACTTACTGCATCTGATATAAGAAAATGGATGGGAGAGTTTCATGAAATCAGAAATGTTGCCAAATATGCAGCGAGGCTGGGCCAATCATTCAGCTCTTCTAGGGAAACAGTGAGCGTTGGCAGACATGAAACTGAAATTATTCCTGATGTAGAATTTAGAAGGGGTGAAACCAAATACTGTTTCTCTGATGGAATTGGGAAGATATCTTATGAACTGGCTCAAGAAGTGGCTGAGAAATGTGGTTGTAGGGATAATACTCCATCTGCATTTCAAATCAGATATGGAGGGTACAAAGGTGTTGTTGCTGTTGATCCTACCTCATCAACTAAACTGTCCTTAAGAAAGAGCATGTGCAAGTACAAGTCAGAAAACACAAAATTGGATGTTTTGGCATGGAGCAAATACAAACCTTGTTACCTTAATCGTCAAATAATCGCTCTCTTGTCCACCCTGGGGGTTCAGGACAGAGTCTTCAGAAAGAAACAAAGAGAGGTCCTTAATCAACTCAAAGTGTTATCAAGAAGGCCCTTGATGGTATTAGACTATATGTCCACAGGAGAGATTGCAAAGGTTTTAAAGGAAATGCTCATTTGTGGCTTTCATCCAAGTAAGGAACCATTTCTTTCCATGATGTTGCAAACATTATATGCATCAAAACTTCAGGAATTGCAGCTCAAAACTAGGATACTTGTTAAGAAGGGTAGAGCATTGTTAGGATGCTTGGATGAAACTAGGACTCTAAAATATGGAGAGGTATTTGTGCAGATAGCTCACCAAAGAAATAAACAGAATCTTGCTATGTCCTCTCTTTCTTCTAATAGAAATGCATCCAACAAAAGCAAACATATTGTTAAGGGAAAGGTAGTTGTAGCCAAAAATCCCTGTCTACACCCTGGAGATGTGCGAGTTTTAAGAGCAGTGGATGTGCCTTCTCTGCATCATATGGTGGACTGTGTTGTTTTTCCACAGAAGGGGAGAAGACCACATCCCAATGAATGTTCTGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGTTGGGACCCTGATCTTATTCCTCCTCGTCAGGAAAATCCCATGGATCATGCACCATCTCCAGTTGTGAATGTGGATCATGATGTTACATTACAGGAAGTTCAGGAGTATTTTGCTCACTACATAGTTAAAGACAGGTTGGGCATTGTTGCAAGTGCACACATGGTGTTTGCTGATAAGGATCCTCAAAAGGCAATGAGTCCTGCATGTATTGAGCTTGCAAAGCTACACTCAGTTGCTGTTGATTTTGCAAAATCTGGTGTGCCAGCAGAAATTCCACAACATCTACGGGTGGAAGAGTATCCTGATTTCATGGAAAAGCCAGAGAGACCAAGTTACCAATCAAATAGCATAATAGGAAAGCTGTATCGTGAGGTGAAGAATGTTGCACAACACAAGAGTCTGACCAAACCCTTCAGAAGAAGAGTGGCAAGGCAATCATACGACCGTGACATGGAGATTGATGGCTTTGAGAAGTACACAGCAAGTGCCAGTGAATACAAGAACATGTATGACTTCAAGTTGGGGAACCTGATGGATTACTATGGCATAGAAACAGAAGCAGAAATCATCAGTGGCAATATCTTGAAAATGTCAAAATCCTTCAGTGAAAGAAAGGACTTGGAAGGAATTAATCATGCTGTGATGTCTCTAAGAAAGGAGGCTAGAAACTGGTTCAATGTGATGATAAAAAACAAGTCAAATTCTCAAGTTGTTGATGATGTTTATGCAGTAGCATCAGCTTGGTACCATGTTACATATCATCCTAGGTACTGGGGATCCTACAATCAAGGACTAAACAGGGATCATTTCCTCAGCTTCCCATGGTGTGTGCATGACACTCTCATCCAGATAAAGAAGGACAAAATCAAACAGAGAACTTTCACAATGAATCACTTGAAAATTCTGAAACTGATTCCACTGTTACTGTGTTTCTTCCTATTGTGGATAATAGTGCCATATCTAAGGAATTGA 3417 0.3995 MCKTIRMHGFPAKVSAEEVRKFLEQNTGPQSVHAVEVEQLKDEDPTTHVKVKFTNTKSVETILVLVTQHLSYGDHVLNATEIELDLLPKQRNFSHSMDDIAVHFGCQTSKNKLSVLWEHPSASVKFGSRLRKMYIFFHYLLVDYKLQISSESMSRIELHHSHDLTKKLLLFQLRNAPLIYEKDVSKSKYFKEASDNHWFRGVDFTPSCSIGQSSTLCFELPKSVEVPKFNQHYRNYNEVDDSVFTLERKHLGFSSNLNFVPIVIPPEGFNLPYKILFKINSLIQHGCLPVLAIDIDFFQLVDPGKVKLEYIESALHRLDQIKVCCYEPARWLEKQYKKYSENSLLPIISAISLDDGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFLDEDMDKLHSSDLVPRSSSADMDRETKLHERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRAGLTASDIRKWMGEFHEIRNVAKYAARLGQSFSSSRETVSVGRHETEIIPDVEFRRGETKYCFSDGIGKISYELAQEVAEKCGCRDNTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTKLDVLAWSKYKPCYLNRQIIALLSTLGVQDRVFRKKQREVLNQLKVLSRRPLMVLDYMSTGEIAKVLKEMLICGFHPSKEPFLSMMLQTLYASKLQELQLKTRILVKKGRALLGCLDETRTLKYGEVFVQIAHQRNKQNLAMSSLSSNRNASNKSKHIVKGKVVVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAPSPVVNVDHDVTLQEVQEYFAHYIVKDRLGIVASAHMVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEIPQHLRVEEYPDFMEKPERPSYQSNSIIGKLYREVKNVAQHKSLTKPFRRRVARQSYDRDMEIDGFEKYTASASEYKNMYDFKLGNLMDYYGIETEAEIISGNILKMSKSFSERKDLEGINHAVMSLRKEARNWFNVMIKNKSNSQVVDDVYAVASAWYHVTYHPRYWGSYNQGLNRDHFLSFPWCVHDTLIQIKKDKIKQRTFTMNHLKILKLIPLLLCFFLLWIIVPYLRN 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00322 1138 Pfam RNA dependent RNA polymerase 365 940 IPR007855 GO:0003968
Viun2g00322 1138 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1107 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00322 Viun-Chr2 6355630 6372153 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00322 2 6355630 6372153 Viun2g00322 2 6355630 6372153 ECH