Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00310 ATGATAACCAGATCGAGGAAATTGAAGCGCAAGCTCGAGCTGGAGCCACCTCCGGTCATCGTCACCAAGAAGCATCGGCAGAAGCTGCCTCGCCGGCGAAGGCAAAACTTCTCGCCGGTACTTCTCGTCAGCGACTCTTGCCAGAATCCTCGTTTCTCCGTGGATTCCAGTTCCGGCTCCGACTACGCTGCTGGCGATGCTTCTTGCAACTCCAGCAGAGCTTCCATCGCCGGCAAGGGAAACACGAACTCGAGAAATGAATCATCGATCGATTCAACGAGAAACCAGAGGTTCGAGAAGCGAAACGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGCCGACTCCAATTCGTTCGCTCGAGATCGAAGCAGGAGGTCAATTCTGAAGTTTAAAAGCGGAAGAGAATGTAATAATCAGAGAGGAGAAGATGACGTTTCGGAAGTGTTCATGAAATCGGATATTACTGGTATTCTGAAGTTCAAAAGTGGAAGCGAGAGTAAGAATATAAAGAAAAATGATGACGTTTCGTGCGGGAAATCAGAGATTACTTGCGAGGAACAGGTCAATTCGAAGTCCTCCAGTGAAGGCAACGGAAACATGAAAATCTCTTCGGAGTCAAACGGAAACGACGTCGTGTCGTTTAGTTCCTTTGTTCGCGCGTCGTTAGAGGAGGAAAAGGATAGCAGCAAGGAAAACAGAGCGTTGGAATGTGAATACTCTGTAGGCTCTAAAAACCTCCACGCGGATGAGAATTGCGCGGATTTAGTAGCTCAATCGATGACGAGGCAGGAATCGGAAAATGACGACGTCGTTGTGGACCTCACTTGCTCTGAGGAACTGCGTTTATCAAACTGTGACGACGATGACGAATCGGAATATTGTTCCAGTCAGGGAACTATGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAATGCTCGGAGCAGGAGCTTTCGGATTACACTCCGTCGCTGTTCGTGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGTCGGAGAAACTCCTTCACCGACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAACTTCTGCTTCTCCAGTGGTGAACTCTTCTTCAAGTGACGAAGATGAAGCCGATTTTGTGAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCGAATTATGCTGAAAGATATTTCTCTACCACTGAATTCGGAGAGACCGTGCTTGAGCAACGTGCGCAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACGATATTTCTTGGCGTCAACCTACTTGACCGTTTCCTAAGCAAAGGATACTTCAAAGCCAAAAAACGCCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCAACCAGGATCGAAGAAAATCAGCAACAAAACAGAGTGGGGCAAAGCAGTTTCAACGTAGGAAGCAATAGGTACAGTAGAGGCGAGGTGGTAGCCATGGAATGGATGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCTGCCTACCATCTACAATTTCTTGTGGTATTACCTAAAAGCAGCGAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAACAACTGTGCTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTTGCTGGTCTTGAATTCAATCAAAGTTCACCGCTCAAAGTAATCGGGATCCACGTTAGATCAAAAGATGAGAATTTGTACGAGTGCATAGGGAGCCTGGAAACGCTGTTACGCTATATAGGATAA 1851 0.4727 MITRSRKLKRKLELEPPPVIVTKKHRQKLPRRRRQNFSPVLLVSDSCQNPRFSVDSSSGSDYAAGDASCNSSRASIAGKGNTNSRNESSIDSTRNQRFEKRNENEVEVSESSCADSNSFARDRSRRSILKFKSGRECNNQRGEDDVSEVFMKSDITGILKFKSGSESKNIKKNDDVSCGKSEITCEEQVNSKSSSEGNGNMKISSESNGNDVVSFSSFVRASLEEEKDSSKENRALECEYSVGSKNLHADENCADLVAQSMTRQESENDDVVVDLTCSEELRLSNCDDDDESEYCSSQGTMFSEFHSEIFGECSEQELSDYTPSLFVDSGSQFSEGSVGETPSPTYLLFLQYRKEFTTLTSASPVVNSSSSDEDEADFVRFEDSDDEDSYQMLRKRERKQGFVSNYAERYFSTTEFGETVLEQRAQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLSKGYFKAKKRLQIVGIACLTLATRIEENQQQNRVGQSSFNVGSNRYSRGEVVAMEWMVQEVLKFQCFLPTIYNFLWYYLKAANADAVVEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEFNQSSPLKVIGIHVRSKDENLYECIGSLETLLRYIG 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00310 616 SUPERFAMILY Cyclin-like 525 612 IPR036915 -
Viun2g00310 616 MobiDBLite consensus disorder prediction 1 22 - -
Viun2g00310 616 MobiDBLite consensus disorder prediction 39 91 - -
Viun2g00310 616 PIRSF Cyclin_A_B_D_E 347 614 IPR046965 GO:0016538|GO:0044772
Viun2g00310 616 PIRSF Cyclin_A_B_D_E 48 317 IPR046965 GO:0016538|GO:0044772
Viun2g00310 616 Gene3D - 414 518 - -
Viun2g00310 616 MobiDBLite consensus disorder prediction 1 125 - -
Viun2g00310 616 Gene3D - 519 615 - -
Viun2g00310 616 Pfam Cyclin, N-terminal domain 390 521 IPR006671 -
Viun2g00310 616 PANTHER CYCLINS 364 583 IPR039361 -
Viun2g00310 616 SMART cyclin_7 429 516 IPR013763 -
Viun2g00310 616 SMART cyclin_7 529 610 IPR013763 -
Viun2g00310 616 MobiDBLite consensus disorder prediction 187 210 - -
Viun2g00310 616 MobiDBLite consensus disorder prediction 92 108 - -
Viun2g00310 616 SUPERFAMILY Cyclin-like 383 521 IPR036915 -
Viun2g00310 616 Pfam Cyclin, C-terminal domain 525 611 IPR004367 -
Viun2g00310 616 ProSitePatterns Cyclins signature. 424 455 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00310 Viun-Chr2 6178235 6183689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00310 424 584 Core Cell Cycle Gene Families AT5G25380 37.349 3.61e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00310 2 6178235 6183689 Viun2g00310 2 6178235 6183689 ECH