Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00309 ATGTCGGTCACTTTGGACTATGCTGGTCAAAGAGCTGAAGCTATTCCCCAATCTACACCAATACCAAATTGGACTATTCATGTGTCAGACATAAGAACAGTGAAGGTTAGCAACATATCACTGGTTACTTCCAAGGTGGAGATTCGAGAATTCTTTTCATTCTCAGGTGATATTCAGTATATTGAGATGCAAAGGGAAAGTGACCGCACTCAGGTTGCTTATGTTACATTTAAGGATACACAGGGAGCAGACACAGCAGTTCTCTTAACAGGTTCAAAGATAGGTGATCTATATGTCACAATCACACCTGTGGAGAAGTATCAGCTGCCCCCTGATGCTGTTCCAGTAAGTCCGAGAAACCAAAGTGGTGATGCAGTACAAAAGGCTGAAGATGTAATGAGCAGCATGCTTGCGAAGGGTTTCATTTTAGGAAAGGATGCTATCAACAAGGCAAAAGCCTTTGATGAGCGTCACCAGTTGACCTCAAATGCTTCTTCCAGAGTTGCTTCCTTTGATCGTAGAATGGGTTTCAGTGACAAAATAAGTATTGGAACAGCTATTGTGAATGGAAAGGTGAGAGAGATGGATGAAAGATATCAGCTTTCTGAAATTACAAAGTCTGCTCTTGCTGCTGCAGAGCAAAAGGCAAGCAGTGCTGGATCTGCTATCATGAGCAATTCTTATGTGTCAACTGGAGCTTCATGGGTGTCTAGTGCCTTCAATGCCATAGCAAAGGCAGCAGGGGATGTCAGCACCATGACAAGGGAGAAGGTTGAACAGGCAGAGGTGGAAAGGAATGAGATCATTTATAGTGAAAGGAAAGGGACTGTTGATGAATTTGGAAAGAAACACTTTCAGGATGCTTCAGACATGGGCCCTGCAATAGTTCCTGTTAATTCACATGATGACCATAAGCTAGAAATTATATAA 930 0.4258 MSVTLDYAGQRAEAIPQSTPIPNWTIHVSDIRTVKVSNISLVTSKVEIREFFSFSGDIQYIEMQRESDRTQVAYVTFKDTQGADTAVLLTGSKIGDLYVTITPVEKYQLPPDAVPVSPRNQSGDAVQKAEDVMSSMLAKGFILGKDAINKAKAFDERHQLTSNASSRVASFDRRMGFSDKISIGTAIVNGKVREMDERYQLSEITKSALAAAEQKASSAGSAIMSNSYVSTGASWVSSAFNAIAKAAGDVSTMTREKVEQAEVERNEIIYSERKGTVDEFGKKHFQDASDMGPAIVPVNSHDDHKLEII 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00309 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Viun2g00309 309 SUPERFAMILY RNA-binding domain, RBD 18 111 IPR035979 GO:0003676
Viun2g00309 309 Gene3D - 28 102 IPR012677 -
Viun2g00309 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Viun2g00309 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 31 261 - -
Viun2g00309 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 96 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun2g00309 Viun-Chr2 6174088 6177553 Dispersed/Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00309 2 6174088 6177553 Viun2g00309 2 6174088 6177553 ECH