Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00282 ATGGGAGGGGGTCACATGGGGTGGTTCCTCTTGTGTTCTTCTTCTCTGCTTTTTTTTGCAGTGATTGCTTCATCTGGGTCACTCGCAAACTTGCCCATCATAGCCTTTGAGGATGGCTACACCCCCTTGTTTGGGGACCATAACTTGGCCATCCATAGAGATGGAAAATCAGTTCACCTTTCACTTGATGAAAGAACAGGTTCTGGGTTTGTGTCTCATGACCTTTACCTTCATGGCTACTTCAGTGCCTCGATTAAGTTGCCTTCTGATTACACAGCTGGAGTTGTGGTTGCATTTTATATGTCAAATGGTGACATGTTCCAGAAGAACCACGATGAGATAGACTTTGAGTTTTTGGGGAACATTAGAGGCAAAGACTGGAGGGTTCAGACCAATGTTTATGGCAATGGAAGTACCAACATTGGTAGAGAGGAAAGATGTGGCCTATGGTTTGATCCTGCTGAGGATTTCCATCAGTACAGTATTCTCTGGACTGATTCTAAGATCGTATTTATGGTGGATGATGTTCCTATCAGGGAAGTTATGAGAACAGAATCTATGGGAGGAGATTTCCCCTCAAAGCCAATGACTTTGTATGCCACCATATGGGATGCATCTGATTGGGCCACCAATGGAGGCAAATATAGAGTAAATTACAAGTATGCACCCTATGTTGCTGAGTTCTCAGACCTTGTTCTGCATGGCTGTGCAGTTGATCCCATTGAGCATGTGACCAAGTGTGACAGTAGTTTCCAAGATTCTGAGGCAGAGCCTTCTGGCATCACCCCAGCACAAAGAACCAAAATGGACAACTTCAGGTTGAAGCACATCACATACTCTTACTGCTATGACACTGTTAGATACAAAGTCCCTCCACCAGAGTGTGTCATCAAACCCCAAGAAGCTCAAAGGCTTAGAAAGTTTGATCCCGTCACGTTCGGCAACGGCCGGCGCCACCGTGGAAAACGACACCACCGTAGTAGAGGTAGTCAGGAAGAGGCTGCCTCTTCATTTTAA 1017 0.4562 MGGGHMGWFLLCSSSLLFFAVIASSGSLANLPIIAFEDGYTPLFGDHNLAIHRDGKSVHLSLDERTGSGFVSHDLYLHGYFSASIKLPSDYTAGVVVAFYMSNGDMFQKNHDEIDFEFLGNIRGKDWRVQTNVYGNGSTNIGREERCGLWFDPAEDFHQYSILWTDSKIVFMVDDVPIREVMRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAEFSDLVLHGCAVDPIEHVTKCDSSFQDSEAEPSGITPAQRTKMDNFRLKHITYSYCYDTVRYKVPPPECVIKPQEAQRLRKFDPVTFGNGRRHRGKRHHRSRGSQEEAASSF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00282 338 Gene3D - 24 295 - -
Viun2g00282 338 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 35 295 IPR044791 GO:0004553
Viun2g00282 338 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 298 IPR013320 -
Viun2g00282 338 MobiDBLite consensus disorder prediction 307 338 - -
Viun2g00282 338 FunFam Xyloglucan endotransglucosylase/hydrolase 24 297 - -
Viun2g00282 338 CDD GH16_XET 34 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Viun2g00282 338 Pfam Glycosyl hydrolases family 16 38 220 IPR000757 GO:0004553|GO:0005975
Viun2g00282 338 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 259 295 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Viun2g00282 338 PIRSF EndGlu_transf 4 300 IPR016455 GO:0010411|GO:0016762|GO:0042546
Viun2g00282 338 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 26 228 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00282 Viun-Chr2 5681362 5684035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00282 10 337 Glycoside Hydrolase AT2G01850 68.389 9.87e-166 463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00282 2 5681362 5684035 Viun2g00282 2 5681362 5684035 ECH