Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00338 ATGACGCTGTGGATCAAGGCCACTGGAGCGTTGAAGGATAGGTACAGCATTTGGGTGGCGAAGCTCTTACCCAGTGGTCCATGCAGGAACCCTGATCTTGAAACGGTCATCATCAAGGCAACAAGCCACGACGAACAATGCATGGATTACAAGAACGTTCAGAGGGTTTTCAAATGGCTACGCACCTCACCCTTGTACCTTCAGCCTCTTCTCTACACTCTTTCAATCAGGATGGAAAAGACTCGTTCTTGGGTTGTGGCACTCAAGGGCTTGATGCTCATTCATGGGGTCTTCTGTTTTGATCTTCCCGGGGTGCAGAAGATGGGAAGGTTGCCGTTTGATTTGTCCTTGTTCAGCGACGGACACGTAAACCCTAACAGGGCCTGGGTTTACAACGCCTTTGTTAGGGCTTATTTCTTGTATTTGGACCAAAAATCAGCGTTTGTGAGGATGGAAGCAACGAGAGAGACCAAACGTGGAGGAAAGGAGAAGGAAGAGAGCGTGATGGAAGAGCTGCAGAGCTTGGAGAAGCTGCTTGATTTGATCGATTTGCTTCTGCAAGTGAAGCCCAGGAGCCCCCGCATGAACGTGGTGCTTGTTCTTGAGGCTATGGATTGTGTCATGGACGAGGTTTTGGAAGTGTATGAGAAGTTTTCCGCAAGGGTTCATCGAGTTGTGGAGAGAATACTCGACATGGGTGGGGAAGAGGAAGCTAGGGTTGGTCTGGAAGTTGTGAGAAAAGCTGAATTGCAAGGGAACAAGGTAACTACGTACTTCAACTTCTGTAAGGACATTGGTATCCTTAATGTTTCGGACTGCCCTGAAATTGTGAGGGTGGATGAGAAAGACATTGAAGAACTGATAAGAATCAGAGATGGAAAAAATATGGAGAGTGATGAAAGTGATGAGGAAAATGGTGTTGAGGATAATAATTGCAGAGCCATTGTGAGCTTTGAGGAGACGAAGCAGACGGATTTGAAGACTGTGATCACAGACCAATGGGAAGTGTTTGAGGATGATTTAGTAGTTGATGTTATGGATGGTTCAACTGTCACAGCAAATAACCCTTTTCTCGACTATTCTTTCAGCCTCGTACCCTATGTTCCTGTTTCTAACAATTGTGTTCTTCCCGATTTAATTGTTTTGTAG 1149 0.4595 MTLWIKATGALKDRYSIWVAKLLPSGPCRNPDLETVIIKATSHDEQCMDYKNVQRVFKWLRTSPLYLQPLLYTLSIRMEKTRSWVVALKGLMLIHGVFCFDLPGVQKMGRLPFDLSLFSDGHVNPNRAWVYNAFVRAYFLYLDQKSAFVRMEATRETKRGGKEKEESVMEELQSLEKLLDLIDLLLQVKPRSPRMNVVLVLEAMDCVMDEVLEVYEKFSARVHRVVERILDMGGEEEARVGLEVVRKAELQGNKVTTYFNFCKDIGILNVSDCPEIVRVDEKDIEELIRIRDGKNMESDESDEENGVEDNNCRAIVSFEETKQTDLKTVITDQWEVFEDDLVVDVMDGSTVTANNPFLDYSFSLVPYVPVSNNCVLPDLIVL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00338 382 CDD ANTH_N_AP180_plant 33 148 - -
Vimu7g00338 382 FunFam Putative clathrin assembly protein 7 153 - -
Vimu7g00338 382 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 309 IPR045192 GO:0048268|GO:0072583
Vimu7g00338 382 Pfam ANTH domain 32 286 IPR011417 GO:0005543
Vimu7g00338 382 Gene3D ANTH domain 155 305 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vimu7g00338 382 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Vimu7g00338 382 Gene3D - 5 153 IPR008942 -
Vimu7g00338 382 SUPERFAMILY ENTH/VHS domain 32 151 IPR008942 -
Vimu7g00338 382 SUPERFAMILY GAT-like domain 164 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00338 Vimu-Chr7 3970174 3971322 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00338 7 3970174 3971322 Vimu7g00338 7 3970174 3971322 ECH