Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00312 ATGCAAAAGCTTGTACTATTTATAACAAGTTCTCAACTTTGTTTGAGAAAGAAAATTTTCTTGAATATGGCTGCCACATTCTTCTCTCAATCGCTTCTTCAATCCAGCAATCTTTCTCCTTCTTGTCTCTCTCCTCGCATCCCTCATTCTCTGGTTAGCCTTGTCAAACCCTCCTGCCTTGGGGTGGTTTCTGTGAGCAAAAGGGTAAGTGGGGTGGTGCCCAATGCTGCTCTGAAAGCCTTGGAAACTAATTCGGATTTCCCCATTTCGGCTAAGAAGTCCATCGACAACCCCATTGTTGTTATTGATAACTATGACAGCTTTACCTATAATCTTTGCCAGGTTGGTTCATTCTTGATGTTTATTGTGTGGTTCTTTGGTTTTGTCTTGGCTATTCTAACATTGTATGATTTACATTTGAAGTATATGGGAGAGTTAGGATTTCACTTTGAGGTCTACCGCAATGATGAGTTGACAGTGGAGGAGTTGAAAAGGAAAAATCCTAGAGGAGTGCTAATATCACCTGGGCCAGGGGAACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCATTGTTTGGTGTGTGCATGGGTTTGCAGTGCATTGGTGAGGCTTATGGAGGAAAGATTGTTCGTTCTCCTTATGGTGTCATGCATGGAAAAAGTACCTTGGTTTATTATGATGAGCAAGGAGAAGATGGAGTACTTGCTGGACTGTCAAATCCTTTCTTGGCTGGTAGATATCACAGCCTTGTGATTGAGAAAGAGAGTTTTCCTGATGAACTTGAGGCAACAGCCTGGACAGAAGATGGTCTTATAATGGCTGCTCGCCATAAGAAATATAAGCATTTGCAGGGAGTTCAGTTTCATCCGGAGAGCATCATAACTCCAGAAGGGAAGAAAATTGTCCAAAATTTTGTGAAGCTTATTGAGAGAATGGAGGGTGGTGGTTCTTAA 978 0.4192 MQKLVLFITSSQLCLRKKIFLNMAATFFSQSLLQSSNLSPSCLSPRIPHSLVSLVKPSCLGVVSVSKRVSGVVPNAALKALETNSDFPISAKKSIDNPIVVIDNYDSFTYNLCQVGSFLMFIVWFFGFVLAILTLYDLHLKYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAYGGKIVRSPYGVMHGKSTLVYYDEQGEDGVLAGLSNPFLAGRYHSLVIEKESFPDELEATAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKKIVQNFVKLIERMEGGGS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00312 325 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 198 214 - -
Vimu7g00312 325 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 168 182 - -
Vimu7g00312 325 SUPERFAMILY Class I glutamine amidotransferase-like 135 320 IPR029062 -
Vimu7g00312 325 PRINTS Glutamine amidotransferase superfamily signature 293 306 - -
Vimu7g00312 325 PRINTS Glutamine amidotransferase superfamily signature 171 180 - -
Vimu7g00312 325 PRINTS Glutamine amidotransferase superfamily signature 198 209 - -
Vimu7g00312 325 PRINTS Anthranilate synthase component II signature 99 113 - -
Vimu7g00312 325 PRINTS Anthranilate synthase component II signature 293 306 - -
Vimu7g00312 325 Pfam Glutamine amidotransferase class-I 141 314 IPR017926 -
Vimu7g00312 325 FunFam Anthranilate synthase beta subunit 1 97 316 - -
Vimu7g00312 325 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 90 321 - -
Vimu7g00312 325 CDD GATase1_Anthranilate_Synthase 99 314 IPR006221 -
Vimu7g00312 325 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 140 315 IPR006221 -
Vimu7g00312 325 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 125 323 - -
Vimu7g00312 325 Gene3D - 97 316 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00312 Vimu-Chr7 3773332 3777306 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00312 7 3773332 3777306 Vimu7g00312 7 3773332 3777306 ECH