Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00311 ATGGGAGGGGCACGGATGTCAAATGGTGACATGTTCCAGAAGAACCATGATGAGATAGACTTTGAGTTTTTGGGGAACATTAGAGGCAAAGACTGGAGGGTTCAGACCAATGTTTATGGCAATGGAAGTACCAACATTGGTAGAGAGGAAAGATGTGGCCTCTGGTTTGATCCTGCTGAGGATTTCCATCAGTACAGTATTCTCTGGACTGATTCTAAGATCGTGTATGATGCAATCTATTTGAATCCATCCTGCCATCTTTGGTTGTTACATTTTCCTTGTTTTGGTAAAACTAGTCTCTTTACGTGTCCAATTATTGCTAATTATACTCCAGCAACCCTTTGCTTTGATGGAGTAGTGTGA 363 0.416 MGGARMSNGDMFQKNHDEIDFEFLGNIRGKDWRVQTNVYGNGSTNIGREERCGLWFDPAEDFHQYSILWTDSKIVYDAIYLNPSCHLWLLHFPCFGKTSLFTCPIIANYTPATLCFDGVV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00311 120 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 120 IPR000757 GO:0004553|GO:0005975
Vimu7g00311 120 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 12 75 IPR044791 GO:0004553
Vimu7g00311 120 SUPERFAMILY Concanavalin A-like lectins/glucanases 6 76 IPR013320 -
Vimu7g00311 120 Pfam Glycosyl hydrolases family 16 7 76 IPR000757 GO:0004553|GO:0005975
Vimu7g00311 120 Gene3D - 3 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00311 Vimu-Chr7 3763654 3764966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00311 6 76 Glycoside Hydrolase AT2G01850 80.282 8.41e-39 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00311 7 3763654 3764966 Vimu7g00311 7 3763654 3764966 ECH