Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00292 GTCACTTTGGACTATGCTGGTCAGAGAGCTGAAGCTATTCCCCAATCCACACCAATACCGAATTGGACTATTCATGTGTCAGACATAAGAACAGTTAAGGTTAGCAACATATCACTGGTTACTTCCAAGGTGGAGATTCGAGAATTCTTTTCATTCTCAGGTGATATTCAGTATATTGAGATGCAAAGGGAAAGTGACCGCACTCAAGTTGCTTATGTTACATTTAAGGATACACAGGGAGCAGACACAGCAGTTCTCTTAACAGTATGTTTGTGTGCAAATGATTTTTACCTTTTAAACCAAAGTGCTGATGCAGTAAAGAAGGCTGAAGATGTAATGAGCACCATGCTTGCTAAGGGTTTCATTTTAGGAAAGGATGCCATCAACAAGGCAAAAGCCTTTGATGAGCGTCACCAGTTGAGCTCAAATGCATCTTCCAGAGTTGCTTCCATTGATCGTAGAATGGGTTTCAGTGACAAAATAAGTATTGGAACAGCTATTGTGAATGGAAAAGTGAGAGAGATGGATGAAAAATATCAGCTTTCTGAAATGACAAAGTCTGCTCTTGCTGCTGCAGAGCAAAAGGCAAGCAGTGCTGGATCTGCTATCATGAGCAATTCTTATGTATCAACTGGAGCTTCATGGGTGTCTAGTGCCTTTAATGCTATAGCAAAGGCAGCAGGGGATGTCAGCAGCATGACAAGGGAGAAGGTTGAACAGGCAGAGGTGGAAAGGAATGAGATCATTTACAGTGAAAGGAAAGGGAACGTTGATGAATTTGGAATGAAAAACTTGCAGGATGCTTCAGACATGGGTCCTGCAATAGTTCCTGTTAATTCACATGATGACCATAAGCTAGAAATTATATAA 870 0.4115 VTLDYAGQRAEAIPQSTPIPNWTIHVSDIRTVKVSNISLVTSKVEIREFFSFSGDIQYIEMQRESDRTQVAYVTFKDTQGADTAVLLTVCLCANDFYLLNQSADAVKKAEDVMSTMLAKGFILGKDAINKAKAFDERHQLSSNASSRVASIDRRMGFSDKISIGTAIVNGKVREMDEKYQLSEMTKSALAAAEQKASSAGSAIMSNSYVSTGASWVSSAFNAIAKAAGDVSSMTREKVEQAEVERNEIIYSERKGNVDEFGMKNLQDASDMGPAIVPVNSHDDHKLEII 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00292 289 SUPERFAMILY RNA-binding domain, RBD 16 86 IPR035979 GO:0003676
Vimu7g00292 289 Gene3D - 26 89 IPR012677 -
Vimu7g00292 289 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 29 241 - -
Vimu7g00292 289 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 30 111 IPR000504 GO:0003723
Vimu7g00292 289 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 85 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu7g00292 Vimu-Chr7 3551931 3553932 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00292 7 3551931 3553932 Vimu7g00292 7 3551931 3553932 ECH