Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00291 ATGATAACCAGATCGAGGAAATTGAAGCGCGAGCTCGAGCTGGAGCCACCTCCGGTCATAGTCACTAAGAAGCATCGGCAGAAGTTGCCACGCCGGCGAAGGCAAAACTTCTCTCCCGTTCTTCTAGTCAGCGACTCTTGCCAGAATCCTCGTTTCTCTGTGGATTCCAGTTCCGGCTCTGACTTCGCTGTCGGCGTTGCTTCTTGTAACTCCAGCAGAGCTTCCATCTCCGGCAAGGAAAACAGGAACTCGAGAAATGAATCATCGATCGATTCAACGAGAAATCAGAGGTTTGAGAAACGAAACGAGAACGAAGTGGAGGTTTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTCGCTCGAGATCGAAGCAGGAGGTCAATTCTGAAGTTCAAAAGTGGAAGAGAATATAATAGTCTGAGAGGAGAAGATGACGTTTCGGAAGTTTGCATAAAGTCGGATATTACTGGTATTCTGAAGTTGAATAGCGGAAGCAAAAGTAAGAACCTAAAAAGAAATGACGACGTTTCGTGCGGGATGTCAGAGATAACTTGCGAGGAACAGTTCAATTCCAAGTCATCCAGTGATGGGAACGGAAACATGAAAATCTCTTTGGAGTCAAACGGAAACGACGTCGTGTCGTTTAGTTCGTTTGTTCGCGCGTCGTTAGAGGAGGAAAAGGATAGCAGCAAGGAAAACAGAGCTTTGGAATGTGAATACTCTGTAGGCTCTAAAAATCTCCACGCGGAAGAGAACTGCGCGGATTTGGTAGCGCAATCGATGACGAGGCAGGAATCGGATAATTATGACGTCGTTGCGGACCTCACTTGCTCTGAGGAACTGCGTTTCTCATACTGTGACGACGATGACGAATCGGAATATTGTTCCAGTCAGGGAACTGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAATGCTCGCAGCAGGAGCTTTCGGATTACACTCCGTCGCTGTTCGTGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGTCGGAGAAACTTCTTCACCAACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAACTTCTGCTTCTCCAGTGGTGAACTCTTCTTCAAGTGACGAAGATGAAGCCGATTTTGTGAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCGAATTATGGTGAAAGATATTTCTCTACCACTGAATTCGGAGAGACCGTGCTTGAGCAACGTGCGCAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACGATTTTTCTTGGCGTCAACCTACTTGACCGTTTCCTAAACGAAGGATACTTCAAAACCCAAAATCGCCTTCAAATTGTTGGAATAGCATGCCTCACGTTAGCAACCAGAATCGAAGAAAATCAGCAATACAACAGGGTGGGGCAAAGCAATTTCAACGTAGGAAGCAATAGGTACAGCAGAGGCGAGGTGGTAGCCATGGAATGGATGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCGGCCCACCATCTACAATTTCTTGTGCTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGTTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTGGCTGGTCTTGAATTCAATCAAAGTTCACCGCTCAAAGTAATCGGGGTAACTACTATTGCATTATAG 1794 0.4677 MITRSRKLKRELELEPPPVIVTKKHRQKLPRRRRQNFSPVLLVSDSCQNPRFSVDSSSGSDFAVGVASCNSSRASISGKENRNSRNESSIDSTRNQRFEKRNENEVEVSESSCADSNSFARDRSRRSILKFKSGREYNSLRGEDDVSEVCIKSDITGILKLNSGSKSKNLKRNDDVSCGMSEITCEEQFNSKSSSDGNGNMKISLESNGNDVVSFSSFVRASLEEEKDSSKENRALECEYSVGSKNLHAEENCADLVAQSMTRQESDNYDVVADLTCSEELRFSYCDDDDESEYCSSQGTVFSEFHSEIFGECSQQELSDYTPSLFVDSGSQFSEGSVGETSSPTYLLFLQYRKEFTTLTSASPVVNSSSSDEDEADFVRFEDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLEQRAQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLNEGYFKTQNRLQIVGIACLTLATRIEENQQYNRVGQSNFNVGSNRYSRGEVVAMEWMVQEVLKFQCFRPTIYNFLCFYLKAANADAVVEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEFNQSSPLKVIGVTTIAL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00291 597 SUPERFAMILY Cyclin-like 383 521 IPR036915 -
Vimu7g00291 597 SUPERFAMILY Cyclin-like 524 583 IPR036915 -
Vimu7g00291 597 MobiDBLite consensus disorder prediction 1 22 - -
Vimu7g00291 597 SMART cyclin_7 429 516 IPR013763 -
Vimu7g00291 597 Pfam Cyclin, N-terminal domain 418 521 IPR006671 -
Vimu7g00291 597 Gene3D - 519 589 - -
Vimu7g00291 597 MobiDBLite consensus disorder prediction 73 103 - -
Vimu7g00291 597 Pfam Cyclin, C-terminal domain 525 581 IPR004367 -
Vimu7g00291 597 ProSitePatterns Cyclins signature. 424 455 IPR006671 -
Vimu7g00291 597 PANTHER CYCLINS 369 577 IPR039361 -
Vimu7g00291 597 MobiDBLite consensus disorder prediction 1 35 - -
Vimu7g00291 597 MobiDBLite consensus disorder prediction 84 103 - -
Vimu7g00291 597 Gene3D - 415 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00291 Vimu-Chr7 3545504 3550080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00291 383 585 Core Cell Cycle Gene Families AT1G80370 34.404 3.22e-22 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00291 7 3545504 3550080 Vimu7g00291 7 3545504 3550080 ECH