Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00279 ATGTGCAAGACAATTCGAATGCATGGATTCCCAGCTACAGTGTCAGCTGAAGAGGTGAGGAAATTTTTGGAACAAAATACAGGCCCTCAAACTGTTCATGCTGTAGAGGTTCGGCAGCTCAAAGAAGAAGATCCTACCACACATGTTAATGTTAAATTTACAGACAAAAAAAGTGTTGAAACAATCTTGCTGTTAGTTACTCAACACCTATCATACGGTGTCCATGTTTTAAATGCTACAGAAATAGAACGTGACCTTTTGCCAAAACAGAGAAACTTTTCTCACAGCATGGATGACATAGCAGTGCACTTTGGATGTCAAACATCCAAGAATAAACTTAGTGTACTCTGGGAACATCCAAGTGCTTCAGTCAAATTCGGGTCCAGACTGAGAAAGATGTATATATTTTTCCATTATTTGTCTGTGGATTATAAGCTGCAGATTTCTTCTGAGAGTGTGTCACGTATTGAGCTGCATCACTCAGATGATTTATCCAAGAAACTTCTCCTTTTCCAGTTACGCAACGCTCCTCTGATCTATGAGAAAGATGTATCCAAAAGCAAATATTTTAAAGAGGCTTGTGACAACCATTGGTTTCGAGGAGTAGATTTTACCCCGTCATGCAGCATTGGACAATCTTCTACTTTATGTTTTGAGCTTCCAAAAAGTGTTGAAGTTCCAAACTTCAATCAGCACTATCGTAATTATAATGAAGTTGATGACAGTGTCTTCACTCTTGAGAGAAGACACCTTGGTTTCTCTTCTAACTTCAATTTTGTCCCCATTGTGATTCCTCCAGAAGGCTTCAACTTGCCATACAAAATTTTGTTCAAAATCAACTCACTAATTCAGCATGGTTGTCTTCCTGTTCTGGCAATTGACGTCAACTTTTTTCAACTGGTTGACCCTGGAAAAGTAAAGCTTGAATATATAGAAAGTGCTCTGCATAAATTAGATCAAATAAAAGTATGCTGCTATGAACCTGCGCAATGGTTGGAGAAACAATATAAGAAATACTCAGAAAATAGTGCACTTCCAGTATCTAGTGCTATTTCATTGGATGATGGGTTGGTCTATGTGCATAGAGTACAAGTAACTCCATCCAAAATATATTTCTGTGGTCCTGAAGTGAACCTTTCTAACCGGGTTTTGCGCAACTATCCTGAAGGTACTGATAATTTTCTTCGTGTTTCTTTCCTTGATGAAGACATGGATAAACTTCACTCATCAGATTTGGTAACGGACATGGACAGAGAAACAAAGCTTCATGAGAGGGTGCTAGCAACACTTAAAAAAGGCATAGAAATTGGTGATAAGAAATTTGAGTTTCTTGCCTTCTCACCAAGTCAGTTGCGGGATAACTCTGTGTGGATGGTTGCATCAAGAACTGGACTTACTGCATCTGATATAAGAAAGTGGATGGGAGATTTTCATGAAATTAGAAATGTGGCCAAATATGCAGCAAGGCTGGGACAATCATTCAGCTCTTCCAGGGAAACAGTGAGCGTTGGCAGACATGAAATTAAAATTATTCCTGATATAGAATTTAGAAGGGGTGAAACCAAATACTGTTTCTCTGATGGAATTGGGAAGATATCTTATGAATTGGCTCAAGAAGTGGCTGAGAAATGTGGTTGTGGGGATAATACTCCATCTGCATTTCAAATCAGATATGGAGGGTACAAAGGTGTTGTTGCTGTTGATCCTACCTCATCAACTAAACTGTCCTTAAGAAAGAGCATGTGCAAGTACAAGTCAGAAAACACAAAATTAGATGTTTTGGCATGGAGCAAATACAAACCTTGTTACCTTAATCGTCAAATAATCGCCCTCTTGTCCACCCTTGGGGTCCAGGACCGAGTCTTCAGAAAGAAACAAAGAGAGGTCCTTAATCAACTTAAGATGTTATCAAGAAGGCCCTTGATGGTATTAGATTATATGTCCACAGGAGAGATTGCAAAGGTTTTAAAGGAAATGCTCATTTGTGGCTTTCATCCAATTAAGGAACCATTTCTCTCCATGATGTTGCAAACATTATATGCATCAAAATTACAGGAATTGCAGCTCAAAACTAGGATACTTGTTAAGAAGGGAAGAGCATTGTTAGGATGCTTGGATGAAACTAGAACTCTAAAATATGGAGAGGTATTTGTGCAGATAGCTCACCAAAGAAATAAGCAAAATCTTGCTATGTCCTCTCTTTCTTCTAACAGAAATGCATCCAACAAAATCAAACATATTGTTAAGGGAAAGGTAGTTGTTGCCAAAAATCCCTGTCTGCACCCGGGAGATGTGCGAGTTTTAAGAGCAGTAGATGCACCTTCTCTGCATCATATGGTGGACTGTGTTGTTTTTCCACAGAAGGGGAGAAGACCACATCCTAATGAATGTTCTGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGTTGGGACCCTGATCTTATTCCTCCTCGTCAGGAAAATCCCATGGATCATGCACCATCACCAGTTGTGAATGTGGATCATGATGTTACATTACAGGAAGTTCAGGAGTATTTTGCTCACTACATAGTTAAAGACAGATTGGGCATTGTTGCAAGTGCACACATGGTGTTTGCTGATAAGGATCCTCAAAAGGCAATGAGCCCTGCATGTATTGAGCTTGCAAAGCTACACTCAGTTGCTGTTGATTTTGCAAAATCTGGTGTGCCAGCAGAAATTCCACAACATCTACGCGTGGAAGAGTATCCAGATTTCATGGAAAAGACAGACAGACCAAGTTACCAATCAAATAGCATAATAGGAAAGCTGTATCGTGAGGTGAAGAATGTTGCACAGCACAAGAGTCTCACCAAACCATTCACAAGAAGAGTGGCAAGGCAATCATACGACCGTGACATGGAGATTGATGGCTTTGAGAAGTACACAGCTAGTGCCAGTGAATACAAGAATATGTATGACTTCAAGTTGGGGAACCTAATGGATTACTATGGCATAGAAACAGAAGCAGAAATAATCAGTGGCAATATATTGAAAATGCCAAAATCATTCAGTGAAAGAAAGGACTTGGAAGGAATTAATCATGCTGTGATGTCTCTAAGAATGGAAGCTAGAAGCTGGTTCAATGTGATGATAAAAAACAAGTCATCAAATTCTCAAGCTGATGCTGATGCCTATGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCTAGGTATTGGGGATCCTACAATCAAGGGCTAAACAGGGATCATTTCCTCAGCTTCCCATGGTGTGTGCATGAAACTCTTATGCAGATAAAGAAGGACAAAATCAGACAGAGAACTTTTACCATGAATAACTGGAAAATACTGAAACTGATTCTACTATTACTGTTTTTCTTGCTTTTGTGGATAACAGTGCCTTATCTAAGGAATTGA 3405 0.3932 MCKTIRMHGFPATVSAEEVRKFLEQNTGPQTVHAVEVRQLKEEDPTTHVNVKFTDKKSVETILLLVTQHLSYGVHVLNATEIERDLLPKQRNFSHSMDDIAVHFGCQTSKNKLSVLWEHPSASVKFGSRLRKMYIFFHYLSVDYKLQISSESVSRIELHHSDDLSKKLLLFQLRNAPLIYEKDVSKSKYFKEACDNHWFRGVDFTPSCSIGQSSTLCFELPKSVEVPNFNQHYRNYNEVDDSVFTLERRHLGFSSNFNFVPIVIPPEGFNLPYKILFKINSLIQHGCLPVLAIDVNFFQLVDPGKVKLEYIESALHKLDQIKVCCYEPAQWLEKQYKKYSENSALPVSSAISLDDGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEGTDNFLRVSFLDEDMDKLHSSDLVTDMDRETKLHERVLATLKKGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTASDIRKWMGDFHEIRNVAKYAARLGQSFSSSRETVSVGRHEIKIIPDIEFRRGETKYCFSDGIGKISYELAQEVAEKCGCGDNTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTKLDVLAWSKYKPCYLNRQIIALLSTLGVQDRVFRKKQREVLNQLKMLSRRPLMVLDYMSTGEIAKVLKEMLICGFHPIKEPFLSMMLQTLYASKLQELQLKTRILVKKGRALLGCLDETRTLKYGEVFVQIAHQRNKQNLAMSSLSSNRNASNKIKHIVKGKVVVAKNPCLHPGDVRVLRAVDAPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAPSPVVNVDHDVTLQEVQEYFAHYIVKDRLGIVASAHMVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEIPQHLRVEEYPDFMEKTDRPSYQSNSIIGKLYREVKNVAQHKSLTKPFTRRVARQSYDRDMEIDGFEKYTASASEYKNMYDFKLGNLMDYYGIETEAEIISGNILKMPKSFSERKDLEGINHAVMSLRMEARSWFNVMIKNKSSNSQADADAYAIASAWYHVTYHPRYWGSYNQGLNRDHFLSFPWCVHETLMQIKKDKIRQRTFTMNNWKILKLILLLLFFLLLWITVPYLRN 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00279 1134 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1101 IPR007855 GO:0003968
Vimu7g00279 1134 Pfam RNA dependent RNA polymerase 365 935 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00279 Vimu-Chr7 3398659 3405726 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00279 7 3398659 3405726 Vimu7g00279 7 3398659 3405726 ECH