Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00269 ATGGCGACCATGACGAGCTTGATCGGTCTCATCAACAAGATCCAACGCGCCTGCACGGTGCTCGGCGACCACGGCGGCGAGGGAATGTCGCTGTGGGAGGCGCTTCCCACCGTCGCGGTGGTTGGAGGACAGAGTTCAGGGAAATCTTCAGTGCTGGAAAGTGTTGTGGGGAGGGATTTTCTGCCACGTGGATCTGGTATTGTCACACGGAGGCCACTAGTGCTGCAACTTCACAAGACAGAAGATGGGAAACAGGAATATGCTGAGTTTCTTCATCAACCAAGGAAGAGATTCTCTGACTTTGCTTCTGTGAGACAAGAAATTTCAGATGAAACAGATCGTATAACTGGGAAAACAAAGGCAATTTCAAACGTTCCAATTCAACTCAGCATATATTCTCCACATGTTGTGAACTTAACCCTCATCGACCTTCCTGGATTGACAAAGGTTGCTGTAGAGGGACAATCAGAGTCTATCGTTCAAGATATTGAGAACATGGTCCGCTCTTATATTGAGAAGCCCAATTGCATTATATTGGCCATCTCTCCTGCAAATCAAGATATTGCTACTTCAGATGCAATAAAAATTTCAAGAGAAGTTGATCCTTCAGACTCGTTTAGAAAGGAGCTAATGTGGTCGAGGTATTTTATTCTTTTTTCAGGTGAAAGGACATTTGGGGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCAGTTGAGGTTCTCGAAGGAAGACAATACAGGTTGCAGCATCCTTGGGTTGGAATTGTCAATCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATTGTTGCTCGCAAGAAGGAGCGTGAATATTTCGAGACTAGTCCCGAATATGGACATTTGGCACATAAAATGGGGGCAGAATATCTGGCCAGACTTCTATCCCAACATTTGGAGCTTGTTATTAGGCAGAAGATACCCAGTATCATTGCCTTAATAAAGAAAGCCATTGACGAGCTTAACGCAGAGCTAGACCGAATTGGCAGGCCAATAGCTGTGGATTCAGGGGCGAAGCTATACACAATTTTACAGATGTGTCGAGCATTTGACAAAGTATTTAAAGAACACCTGGATGGAGGCCGTCCTGGTGGGGACCGGATATATGGTGTTTTTGACCACCAATTACCAGCTGCTTTAAAAAAGCTCCCATTTAATCGTCATCTTTCCGTAAAGAATGTTGAACGAGTAGTTACAGAAGCGGATGGTTATCAGCCACATCTAATTGCTCCAGAGCAAGGCTACAGAAGACTTATTGAGGGATCTATCGGCTATTTCAAAGGCCCAGCGGAAGCCTCTGTGGATGCTGTCCACCTAATTCTGAAGGAGCTTGTTCGGAAGTCAATTGCAGAAACTGAGGAATTGAAGAGGTTTCCCACCCTTCAAGCTGATATAGCTGCTGCTGCAAACGATGCTTTGGAACGATTCCGTGAAGAAAGTAGGAGGACTGTTATCCGGATGGTGGATATGGAGTCTGGCTATCTAACAGTGGAATTTTTTCGGAAGATGCATCTTGAACCAGAAAAAAATTCAGATCCAAAGAACCCAAATCGAAGTACTCCTAATCCCAGTGTGGATACTCACTCAGATAGTCACCTCAATAAAATTGGGTCAAATGTTAATGGTTATATCAACATGGTTTGTGATTCACTAAAACATTCTATTCCCAAAGCCGTGGTTCATTGTCAAGTTAGAGAGGCAAAGAGGTCATTGCTAAACCAATTTTATGTTCAAGTTGGGAAAAGGGAGAAGGATCAATTGGGAGCGTTGTTGGATGAAGACCCTGCACTTATGGAAAAGAGATCACAACTAGCTAAAAGGCTTGAATTATACAAGCAAGCTATGGATGATATTGATGCTGTGGCTTGGAAATAA 1905 0.4331 MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGKQEYAEFLHQPRKRFSDFASVRQEISDETDRITGKTKAISNVPIQLSIYSPHVVNLTLIDLPGLTKVAVEGQSESIVQDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPSDSFRKELMWSRYFILFSGERTFGVLTKLDLMDKGTNAVEVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGAEYLARLLSQHLELVIRQKIPSIIALIKKAIDELNAELDRIGRPIAVDSGAKLYTILQMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFNRHLSVKNVERVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHLILKELVRKSIAETEELKRFPTLQADIAAAANDALERFREESRRTVIRMVDMESGYLTVEFFRKMHLEPEKNSDPKNPNRSTPNPSVDTHSDSHLNKIGSNVNGYINMVCDSLKHSIPKAVVHCQVREAKRSLLNQFYVQVGKREKDQLGALLDEDPALMEKRSQLAKRLELYKQAMDDIDAVAWK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00269 634 FunFam Dynamin-related protein 1C 349 611 - -
Vimu7g00269 634 MobiDBLite consensus disorder prediction 516 542 - -
Vimu7g00269 634 PANTHER DYNAMIN 6 631 IPR022812 -
Vimu7g00269 634 SMART GED_2 538 631 IPR003130 GO:0003924|GO:0005525
Vimu7g00269 634 Pfam Dynamin family 38 230 IPR045063 -
Vimu7g00269 634 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 318 IPR030381 GO:0005525
Vimu7g00269 634 Pfam Dynamin central region 239 506 IPR000375 -
Vimu7g00269 634 SMART dynamin_3 4 269 IPR001401 GO:0003924|GO:0005525
Vimu7g00269 634 CDD DLP_1 35 318 IPR001401 GO:0003924|GO:0005525
Vimu7g00269 634 Gene3D - 4 327 IPR027417 -
Vimu7g00269 634 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Vimu7g00269 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 326 IPR027417 -
Vimu7g00269 634 Gene3D Dynamin, middle domain 349 611 - -
Vimu7g00269 634 Pfam Dynamin GTPase effector domain 539 631 IPR003130 GO:0003924|GO:0005525
Vimu7g00269 634 PRINTS Dynamin signature 35 53 IPR022812 -
Vimu7g00269 634 PRINTS Dynamin signature 133 150 IPR022812 -
Vimu7g00269 634 PRINTS Dynamin signature 60 77 IPR022812 -
Vimu7g00269 634 PRINTS Dynamin signature 183 201 IPR022812 -
Vimu7g00269 634 MobiDBLite consensus disorder prediction 524 542 - -
Vimu7g00269 634 FunFam dynamin-related protein 1E 4 327 - -
Vimu7g00269 634 ProSiteProfiles GED domain profile. 543 634 IPR020850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00269 Vimu-Chr7 3331920 3344861 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00269 7 3331920 3344861 Vimu7g00269 7 3331920 3344861 ECH