Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00035 ATGGACAAACACACCTTCCTTTTGCAGGCACCTGTTATTGGCCGCCAATGGTTTTCTACTTACCCCTTGGATAATTTGGTTTATTCCATGCAGATAGCTTTGTCAAGAACCTTCTGCATTTATGAGGAGATTGAACCTATGCGCAATGCTGGACTTATCAAAGGAGGTTCTCTAGAGAATGCCATTGTTTGCAGTGCCAGTAAAGGTTGGTTGAATCCACCTCTGCATTTCATTGATGAACCATGTCGTCACAAGATCTTAGACCTCATTGGCGATCTCTCGATGGTTGCTCAATCGGGGAATCAAGGACTCCCAGTAGCACACATCGTAGCTTACAAGGGTGGCCATGCATTGCATGCTGATTTCGCACGCCGCCTGATAGGAATGACTTGA 393 0.458 MDKHTFLLQAPVIGRQWFSTYPLDNLVYSMQIALSRTFCIYEEIEPMRNAGLIKGGSLENAIVCSASKGWLNPPLHFIDEPCRHKILDLIGDLSMVAQSGNQGLPVAHIVAYKGGHALHADFARRLIGMT 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00035 130 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 9 127 IPR004463 GO:0008759|GO:0009245
Vimu7g00035 130 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 9 129 IPR004463 GO:0008759|GO:0009245
Vimu7g00035 130 Gene3D lpxc deacetylase, domain 2 3 130 IPR011334 GO:0008759|GO:0009245
Vimu7g00035 130 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 127 IPR020568 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00035 9 126 Carbohydrate Esterase AT1G25054 70.339 1.48e-57 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00035 7 464340 471347 Vimu7g00035 7 464340 471347 ECH