Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01867 ATGGTGGCTGTGGTCGCCCAGGAAAATGTTGTGGCATTGGTTTCTCGTACCGGTAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCGTACAGATTTAAGATTGGGCAGAAAACTTTGTTGGACGTTTCTGATGAATTGGAAGTTCTGGTTATCAGTTCTCAGAAGGGAAAAGGGATGCTATTTCCTAAGGGAGGTTGGGAATTGGACGAATCAAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCTGGGGTGAGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTACTTGTTCAAGAGCAACTGGAGTTCTGGCCTGAGCAAAACGTTCGTCAAAGAGTATGGATGAGCGTCACCGAAGCAAGGGATGTTTGTCAACACTGGTGGATGAAGGAAGCTCTGGACAGATTAGTAAACCGTCTTGGTGGTCAAAAAGTCGGTCGTGATAATAAGCAAATTCTCGGTTCTATAAACTGCACAAGAGATGCCAAATCTGACTTGTAA 582 0.4467 MVAVVAQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGQKTLLDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNVRQRVWMSVTEARDVCQHWWMKEALDRLVNRLGGQKVGRDNKQILGSINCTRDAKSDL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01867 193 SUPERFAMILY Nudix 21 167 IPR015797 -
Vimu6g01867 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Vimu6g01867 193 Pfam NUDIX domain 54 161 IPR000086 -
Vimu6g01867 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 167 - -
Vimu6g01867 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Vimu6g01867 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Vimu6g01867 193 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Vimu6g01867 193 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01867 Vimu-Chr6 16873700 16874934 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01867 6 16873700 16874934 Vimu1g01122 1 8556512 8557632 PCT