Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01866 ATGGCGAAAACGAAACAAACCCCAACTGTCTTGTTAACCTTATTCTCTCTGGCCACCTTCTTCGTTCTCTCTCTATCCTCTGCTGCGGACTTCTTCCTCTACGGCGGCTGCACGCAGCAACGGTACGCCTCCAACTCGCCCTACGAGTCAAACCTGAACTCCCTCCTCACCTCGCTGGTCAACTCGGCCACGTACTCCTCCTTCAACAAGCTCACCGTGGTGGGCTCCAGCCAGAGCGACGTCGTCCACGGCCTCTACCAGTGCCGTGGCGACCTCGCTATGCCGGACTGCGCCGCATGCGTTACCCGTGCTGTCGCTCGAGCCGGACAGCTCTGCCCGGCGGCGTGTGGCGGCGTGGTGCAACTGGACGGATGCCTCGTGAAGTACGACAACTCCACGTTCCTGGGCGTGGAGGACAAGACGGTGGTGCTGAAGAGGTGTGGGCCCTCCATGGGGTTGGGGTCGGGCACGACCGGCGAGAGGGATGCAGTGTTGGGTGGCTTGACGAGTTCGGGTGGGTATTTTCGGGTTGGCGGGTCGGGTGAGGTGAAGGGCGTGGCGCAGTGTTGTGGGGATTTGAGTTTTGCGGAGTGTCAGGATTGTGTGGGGGATGCGATCCGACGGCTGAGGAGTGAGTGTGCTGCTGCGGATTATGGGGATATGTTCTTGGGGAAATGTTACGTCAGGTTCTCCACAAATGGGGCTCATGCATACAACAATAAAGCCCATGCAGGAAAATCAGACAACGAAGGTGAAAAAACATTTGCAATAATTGTTGGATTATTAGCTGGAGTGGCCATACTCATTATTTTCCTTGCTTTCTTGAGAAGGATGTGTGAGGGACACGGTAAATAA 855 0.5637 MAKTKQTPTVLLTLFSLATFFVLSLSSAADFFLYGGCTQQRYASNSPYESNLNSLLTSLVNSATYSSFNKLTVVGSSQSDVVHGLYQCRGDLAMPDCAACVTRAVARAGQLCPAACGGVVQLDGCLVKYDNSTFLGVEDKTVVLKRCGPSMGLGSGTTGERDAVLGGLTSSGGYFRVGGSGEVKGVAQCCGDLSFAECQDCVGDAIRRLRSECAAADYGDMFLGKCYVRFSTNGAHAYNNKAHAGKSDNEGEKTFAIIVGLLAGVAILIIFLAFLRRMCEGHGK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01866 284 Gene3D - 161 234 IPR038408 -
Vimu6g01866 284 Gene3D - 29 134 IPR038408 -
Vimu6g01866 284 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Vimu6g01866 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 279 - -
Vimu6g01866 284 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Vimu6g01866 284 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Vimu6g01866 284 Pfam Salt stress response/antifungal 178 232 IPR002902 -
Vimu6g01866 284 FunFam cysteine-rich repeat secretory protein 3 29 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01866 Vimu-Chr6 16867360 16868608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01866 11 231 Pollen Coat Proteome AT4G20670 23.967 3.94e-16 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01866 6 16867360 16868608 Vimu1g01121 1 8550629 8552302 PCT