Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01516 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGTTCCACATTGCTGGAGACTTCGTGTGGGTTCCTGTTACAGGAACTGCAGATTATATGGGATGAAGTTGGAGAAGATAAGTTCGAAAGGGAGAAGGTTCTTCTGGATTTGGAGCAGGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGATAGAGCCAATATATCTAGAGCTCGTCTGCATCAGGAAGTGGCCGAGGCAGAGGCTGAATTTACTCACCTTCTTTTGTCCCTTGGTGAACGATCTCTACCTGGACGGCCGGAGAAAAGAGCAGGTTCACTGAAAGAGCAGCTAGATTCAATCACCCCAGCACTTCAAGAAATGCGGTTGAGGAAAGAAGAGAGGCTAAACCAGTTCCGAGCTGTGCAAGGTCAAATTCAAAAAATTTCTGCAGAAATTGCTGGTAACTCAGACAAGGAACCGTCAACTATTATTGTAAATGAGAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGGCTCTACAATGAGAAGAATGAAAGACTTCAGCAAGTGGAGAAATACATAGACATTATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCTTCAATCATCATGGAAGTTCACCCAAGCTTAAATGATTTGTGTGGAATAACAAAAAATATAAGTGACACTATCTTAGATAAACTCAATATCACAGTGGAGTCCCTCTTTGAAGAAAAGAAAATTCGACTGGACAAGCTTCACCATTTAGGCAAAGCACTTTCAAATCTGTGGAACCTTATGGACACACCATATAGTGAGCGACACCCATTTTCTCATGTAATCCATCTGTTGTCACTCTCATCAGCAGAAGTAAAAGACCCGGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTCAAGAGACTGGATCAACTAAAAGCAAGCAAAATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAGCTGGAGTTGATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGATGAACAATATAATTAACCTCATAAACTCAGGGGAGATTGATCATTCTGATCTCCTCTTGAGCATGGATGAACAGATATCTAGAGCAAAAGAAGAGGCTTCTAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGCTGGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGAGCCCGCATAATGGTCAGCAGAATACCAGCTTTGGTAGATATGCTAATAAAAATGACAAGAAGTTGGGAAGAAGAAAGAAACAAAGTTTTCTTGTATGATCAGGTACCTCTGATGGCTATATTGGAAGAATATAATGTACTACGACGAGAAAAAGAGGAGGATATGAAAAGACAGCAGCCTTGGGAAAAAAAGAGGATTCAAATCCAAGTAGTTGAGCGAGAAAATACTTATACGTCAAGACCCAGCACCAGCAGCAGACGTCTTCCAAGTAGAAGCTTGAATGGAGCTTTAGACAGTTCTGTGATCATGAACAGAAGGCTTTCTATGGGAATCCATCAGCTGCCACCCAACACCATAAACTCAGGAAATCAAGGCGTGTCCTTCAATAAGGATGGAAGCAATGCCCTAAGGAAAAAGATTTTTGGCGACCCTGCCTTCACCTCTCAAATGCGATGA 1737 0.4231 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRARLHQEVAEAEAEFTHLLLSLGERSLPGRPEKRAGSLKEQLDSITPALQEMRLRKEERLNQFRAVQGQIQKISAEIAGNSDKEPSTIIVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDIIHSLSTILGKDSSSIIMEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKKIRLDKLHHLGKALSNLWNLMDTPYSERHPFSHVIHLLSLSSAEVKDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRIPALVDMLIKMTRSWEEERNKVFLYDQVPLMAILEEYNVLRREKEEDMKRQQPWEKKRIQIQVVERENTYTSRPSTSSRRLPSRSLNGALDSSVIMNRRLSMGIHQLPPNTINSGNQGVSFNKDGSNALRKKIFGDPAFTSQMR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01516 578 Coils Coil 301 321 - -
Vimu6g01516 578 Coils Coil 53 80 - -
Vimu6g01516 578 Coils Coil 159 190 - -
Vimu6g01516 578 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 16 548 IPR007145 GO:0000226|GO:0008017
Vimu6g01516 578 Gene3D - 372 506 - -
Vimu6g01516 578 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01516 Vimu-Chr6 14309880 14314010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01516 12 556 EF-hand Containing Proteins AT5G62250 36.823 1.46e-94 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01516 6 14309880 14314010 Vimu6g01516 6 14309880 14314010 ECH