Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00642 ATGCCCTCATCCAGGGAGGAACCTAACAATTGGTCCGACCCGCCGGATCAAAGTGGGGTTGAAGGATCAAGAAACTGCTGGATCATCAAGGGAGGACTGCCGAATCTCCTTAGGAGAGGGCTGCCAGATCAAGAAGGGATCAAGAACATGGAAGGAAGAAACAATACCTTAGAGAGGAGGACCAACGGACAAAAAATGAGCATGGCAGAATTGAAGATGAGCATGGTAGAATCTAAAATGAACATGGCAGAATACAGAAGAAATATGCAAGAAATAAGAGAAATGCTGCAAGAAATCAAGATTCACATAAAGGACTTAGGAAGAAGTGAGGAATCTATCATGAAAGGGCAGAAAGAGGGTTCAGATGAAGAGGAGATGGAGGAAGACAAGGGTGAACAAAATTGGAGGCAGCGGGTAGAATTGGCCAGGTTTGAGGGCCTGGACCCATTGGGATGGATCTCTCAGGCAGAGAAGTTTTTTGACACCCAAAACATCAAAGAGAAGGAGAGGCTCAGGAGGCACAATCTATTGGTTCAGGGCTGGAAAAATAAAACCAAGAACCTTTCTTGGAAAGGGCTGAAAGAGGCATTAATAATGGGGTTTGGAGGAAGAGACAGAGGATCTGTTTTTGAGAAGAAAAGAGAAACGGAAGCTGCTGCAGTTTTGAGTGTTGATGGTTTTGCAAGAATTAGAGGGCAGGATAGGAGAGAAGAAAATATTCGTGGGGAGGAAGGCAATGCTGCAAACGGTGATGGAGACATGGGTGTGACTGCTGCTGGAAAAGTTGAAAAAGCTACTGATTTTACTGCTGCAAACTGTGATGGAGACATGGGTGTGACTGCTGCTGGAAAAGTTGAAAAAGCTGCTGATTTTACTGCTGCTGACAAAGTAGAAAAAGCTGTGGTTTCTACTGCCGCTGAAAAAGTTGTTGCTGCTGAGAAAGTTGCTGTTTTTAGTGAAGATAGTGTGGTAGGTTGTGGTGTGAATGTCAAAACAGTAAAGACAGGAAAAAAACGCTCGGGTGGAAGAGAAAATGCAAGCAATTGGGAGCAAAAAGGAGAGGATGCCACTGACAATAATGGAGCTAGGAAGGGTGAGGAGACAACAATTTTTTCATGGGTGAAAAGAGAAGAGTTGATCACTTATGAAGGGATTGACAAGCAAGATCAAACAACAGGGGCAGCAAATGCTTTTAAAGTTCAAAACACCGAAGGATCAACAAAAGCACATCCAAACAGCAAAGAAAATGTAGTCCAAGGGTGCAAGACTTGGCATCAAAAATTCAAGCACCTTTCTTGGAAAAATTTGGCCCCAACTCTACTAAAGATAGTTGAAGGGAACAAAAGAAGCAATCTATGTGAGAATTGGGCAGCAAGTTTGCAAGTAGATGGAGCAGCTGCCAAAAGTGTTGTTGCTACAAAGGCCGACGAAGTCAGAGTTGAGATTTTGAAGACTTCACAAAATTGGGCTAAAAGAATCCAAGAAGAGTTGATGAAGAGGAGCCATGAGATCAAGCCTTCCATTTCCAACCTTGAGGACAAGGGAAAGTGGGTCAGAGCCTCTATAAATAGAGGTAGTGTAACGCGGCAGGAGATATTTGAGTATTTTGTGGTAGAGTCAAGCATATTGTTTGCAGAGAGGGGTTATGCCCTCATCCAGGGAGGTTATGCTCCCATTTTAAGATGGCATCCCCCAGTGATGGACAAGAATATGGGCACCAAGCGAAAGGGTATGGATAGTTTCAACCAACATTTTGCTGTGGTGTATGAGGACAACAGACGGCGGCGTTTGAGCAGCACGCGTGCAATGCAATGCATGGCGGGGCGTGGAGGAGAGCGGAGCTCTGGCACCGGTGGGGTTGGCTGTCGTGTGGAGAGGCGAACCCGATCTAGTGTGGCTAGTGGCGGAAGGCATCGGAATGTCAGGGAACAGAGGTTGATGGTGACAAACTTCAGTGGACAACTTCTCACATGGAAAAACAGTGCCAGACGTTGGTGGACAGTGGCAAATGGCGTCGGGCAGTGGCAAATGGTGTCGAACAGTTGCGGACAACAACTAGGCATTAGTGGATCTCAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAATTTAGAGATAAGAAAACTGAAGTTTCAAATCATCAGCTTACCCAAAAAAAAAGTCCAGAGAGTGGCTATCAGGTGGGATCTGGCAATAAAAATGAGTTGCTAGAGGCTTCTTTTGGAAAAGATTCAGGAATTCCCTACCATGATGAACATCTGGATAATCATCTTGAAGATGATGAGTTGTATGGGAATGGATTGGGAACTGTTGTTGTTCGGTCTCCAAAAGGACCACAGTCATCACTGTTTCGTGACCAAAGTTCTCGTTCTAGCAGCAGCTATGCTTCGTTTGAAGATGTTTCTACTAGCGGAACTGTGGTTTTGCGTAATCAGCACGATGATTCTGATTCTCCACAGACACCAAGGTCCCGATTGGGACTTAATAACAGAAATTCAAATGCCTCATTTGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGTGGATTGAGGAAAGTGAATGTCCGGGATAGATTTGCGCTGGGGAAACTCAACAATGATGTACAAGAAAGCAGGAGAGATCAAATGTCAACCAGCTCTGATTCTTCCAGGTACTTCCATTGCCATATTGCTGGTGTTTTACCTTCTCGTGAATACATGGATGCACAAAAGGGGATTTCAAGATCACAGTATTATATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGCGCCGTTATCTGTTTTGCTTATTCCTTCATTGAAAGAGGCCATTGCTGAGGATCCAGAAGGGCCAATTGTGCAAATTATTATCAATGCTCTTTTAAACATGGAGAGGACAAAGCCCCAATCCTGTGATGCTCTTGTCAAAAACTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGCCGATTACTTAGTAAGACTAAGTCAGTTGAAGAAGCCCGAAATGCCGAGACAGATCTCAAGAAGAAACAAAACAAGGAAATTCATTCAAATAGCAATTTAAGTCCCCTCGCAAGATTTCTTCTCTCAAGGTTTGTGGAAGCTATCATTTACAGTGATTTATTTTATATTTGA 3174 0.4411 MPSSREEPNNWSDPPDQSGVEGSRNCWIIKGGLPNLLRRGLPDQEGIKNMEGRNNTLERRTNGQKMSMAELKMSMVESKMNMAEYRRNMQEIREMLQEIKIHIKDLGRSEESIMKGQKEGSDEEEMEEDKGEQNWRQRVELARFEGLDPLGWISQAEKFFDTQNIKEKERLRRHNLLVQGWKNKTKNLSWKGLKEALIMGFGGRDRGSVFEKKRETEAAAVLSVDGFARIRGQDRREENIRGEEGNAANGDGDMGVTAAGKVEKATDFTAANCDGDMGVTAAGKVEKAADFTAADKVEKAVVSTAAEKVVAAEKVAVFSEDSVVGCGVNVKTVKTGKKRSGGRENASNWEQKGEDATDNNGARKGEETTIFSWVKREELITYEGIDKQDQTTGAANAFKVQNTEGSTKAHPNSKENVVQGCKTWHQKFKHLSWKNLAPTLLKIVEGNKRSNLCENWAASLQVDGAAAKSVVATKADEVRVEILKTSQNWAKRIQEELMKRSHEIKPSISNLEDKGKWVRASINRGSVTRQEIFEYFVVESSILFAERGYALIQGGYAPILRWHPPVMDKNMGTKRKGMDSFNQHFAVVYEDNRRRRLSSTRAMQCMAGRGGERSSGTGGVGCRVERRTRSSVASGGRHRNVREQRLMVTNFSGQLLTWKNSARRWWTVANGVGQWQMVSNSCGQQLGISGSQGTGTFRSVSRPPQFRDKKTEVSNHQLTQKKSPESGYQVGSGNKNELLEASFGKDSGIPYHDEHLDNHLEDDELYGNGLGTVVVRSPKGPQSSLFRDQSSRSSSSYASFEDVSTSGTVVLRNQHDDSDSPQTPRSRLGLNNRNSNASFEDSATNLAEAKAAIQGGLRKVNVRDRFALGKLNNDVQESRRDQMSTSSDSSRYFHCHIAGVLPSREYMDAQKGISRSQYYIDDEESAKIISSSAPLSVLLIPSLKEAIAEDPEGPIVQIIINALLNMERTKPQSCDALVKNLLQRLASSKELSLKDLQELAGRLLSKTKSVEEARNAETDLKKKQNKEIHSNSNLSPLARFLLSRFVEAIIYSDLFYI 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00642 1057 Coils Coil 1006 1026 - -
Vimu5g00642 1057 Coils Coil 68 102 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 337 362 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 717 733 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 777 800 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 771 800 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 812 837 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 1 19 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 606 637 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 689 733 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 1 23 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 111 134 - -
Vimu5g00642 1057 MobiDBLite consensus disorder prediction 335 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00642 Vimu-Chr5 7555759 7562407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00642 682 1046 MAP Kinase Kinase Kinase Kinase AT3G15220 43.935 2.69e-74 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00642 5 7555759 7562407 Vimu5g00642 5 7555759 7562407 ECH