Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00607 ATGTCCACCAAAGGAAAAGACATAGCAGAAGGATCATCAAGATCTTCTTCTTCTGCTACTTCTGCTGTTGTTTCTGATCATCATCAGCAACATCAGCAGCAGCAGCTACCGCATCAGCAACAACAACAGCAACAACAACAACATCCTCTGAGTAGGTATGAATCTCAGAAGAGGAGGGATTGGAACACTTTTGGGCAGTATTTGAGGAATCAAAGGCCTCCTGTGGCACTTTCACAGTGCAATTCCAACCAAGTGCTGGATTTTCTAAGGTACTTGGACCAATTTGGGAAGACAAAAGTGCATGGTCAAGGGTGTCTCTTCTTTGGTCAAGTTGAGCCACCTGGTCCTTGCACTTGCCCTCTAAAACAAGCTTGGGGGAGCCTTGATGCTCTCATTGGAAGGCTAAGAGCTGCATATGAAGAAAATGGAGGCTTGCCTGAGACTAATCCATTTGCCAGTGGTGCCATAAGAGTTTATCTCCGTGAGATTCGAGACTCTCAAGCTAAGGCAAGAGGGATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATCTCATCAAGCCCAACGGGGACACCTCAAACTTACCTTTGCAGCAGTAA 597 0.4556 MSTKGKDIAEGSSRSSSSATSAVVSDHHQQHQQQQLPHQQQQQQQQQHPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNQVLDFLRYLDQFGKTKVHGQGCLFFGQVEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREIRDSQAKARGIPYKKKKKKRNLIKPNGDTSNLPLQQ 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00607 198 MobiDBLite consensus disorder prediction 171 198 - -
Vimu5g00607 198 ProSiteProfiles ALOG domain profile. 52 179 IPR006936 -
Vimu5g00607 198 Pfam ALOG domain 44 165 IPR006936 -
Vimu5g00607 198 PANTHER PROTEIN G1-LIKE2 25 183 IPR040222 -
Vimu5g00607 198 MobiDBLite consensus disorder prediction 1 51 - -
Vimu5g00607 198 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00607 Vimu-Chr5 6697169 6697765 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00607 5 6697169 6697765 Vimu4g01163 4 10326389 10329990 PCT