Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00605 ATGTCCAACAATGGCAGTAACAACAACAACAACCCTTATGTTCATATTTCCCCTCTTCAGACCAGCCGTCCAAACCCAATGGATACAGTGTTTGGTGCATTAAGCCACTGCAGCAGAAAAGTTGGAGATGCAACTAGAAGAGCTGAGATAGTGGCAGATAATCTCTGGAATCATACAGTGGCTAGAATTGTTCAAGGAACAAAGGTGCTTACACTAGGAAGCTCTGATGCATTGTTTCAACAATCATTTGGAGTTTTCGCGGGAGAGAACCTCATAAAGTCCTTTGCTTGCTACTTATCAACATCCACTGGACCTGTGATTGGGACTCTTTATATATCAAATTTAAGATTAGCCTTTTGCAGCGATTATCCACTGTGTCATTATCCATTCTCCCTGCAACAAAACCAGACTCTGCATTACAAGGTAGTGGTGCAAGTGGATCAGTTAAGCACGGCTAGTCCTTCCTCAAATCGATTTAACCCTGCAGAAAAATACATCGAGCTTGTGACAGTGGATGGTTATGAATTCTATTTCATGGGGTTCATAGCATATGACAAGGCTCTCAAGACTATAAGAGAGGTTTTACAACAATATCACAACCATTCCAGAGAAGCTTGA 618 0.4159 MSNNGSNNNNNPYVHISPLQTSRPNPMDTVFGALSHCSRKVGDATRRAEIVADNLWNHTVARIVQGTKVLTLGSSDALFQQSFGVFAGENLIKSFACYLSTSTGPVIGTLYISNLRLAFCSDYPLCHYPFSLQQNQTLHYKVVVQVDQLSTASPSSNRFNPAEKYIELVTVDGYEFYFMGFIAYDKALKTIREVLQQYHNHSREA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00605 205 SMART gram2001c 77 156 IPR004182 -
Vimu5g00605 205 Pfam GRAM domain 78 199 IPR004182 -
Vimu5g00605 205 Gene3D - 75 197 IPR011993 -
Vimu5g00605 205 MobiDBLite consensus disorder prediction 1 22 - -
Vimu5g00605 205 PANTHER GEM-LIKE PROTEIN 2 17 199 IPR037848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00605 Vimu-Chr5 6653043 6655221 Wgd