Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00590 ATGATCTTGCTTGGGATCTTTTCTCCTAGCCTTCAATTGTTACTTTCATATGCAGGTGGTGCTTTAGAAGATCACGTAATGGACACTGTTGGGGTTATTTGTATAGATAATGAGGGGCATGTTACAACTGGAGCATCGAGTGGTGGTATTGCTCTAAAGGTCAGTGGACGTGTTGGGTTGGCAGCAATGTATGGTGCAGGTTGTTGGGCATCATCAAAAGGGCCCTTTGGGTCTCCATTCATGGCTGGTTGTTGTGTATCAGGGGCAGGAGAGTACTTAATGAAAGGATTTGCAGCTAGGGAATGCTGTGTTTCATTGTCACTGTATGATATCATGGGGTGGACTTTTGATGTTGACTTACTTTCTTTCAGCTCACAGTCTGGACCTGCTTCTGCTTGCACAAAAATTTTACGGTCTGTTGTTGAGGATGGCAGGCAATGTGTTACTGATAGCAGTGCAGGGATCTTGGTTGTGCAATCAGATGCATCTTTAACAGATCAAGGAAAATCATCAAGGCTGAAAGCTGTAGAGATTGCTGCTGCATACACTTCCTTGTCCTTTGGAGTAGGATATTTTGGAAGCTCTATGGAACGTCCCAAGGAGTACAAAACAACAAAGCAGGATTGCAATAGATCAATTTGGGGCACGGATAGATCTTTCAAATGGATAGTTAGTGTGACCACGGGTCAAATTTTCCGTGCTGATGAGATGAAGAAGTGTAAAGTTCGACCTTGCACGAAGTATTTAGGGTTCGTTGTGCTTGAAGGTTGGGCAGCACTTGAAGTTTCGAGAGAGGGAAGTTCTAAAGCAGAAGACGCAACAATGTCGATGGGTTATTCGGTGGAACAAGAAAGATGTTTCACTGATCTGCCATTGTGGAGAGAAAACTATGTTAAGGACTGTGAAAACGATGTTAGATGTGAGATGTTGGAAGCAAATGATGAGAGGTTGCTGAAGAGTTTTGAAAATGAAGGTGATACGAAGATAGTTAATGTGCATAAAGCTGTGATGGCTCTTCAAAGCTGGATGAAATTTTTGGTTGGGGTTAAAGTGAAGATTGGGAATAAAGATGAAGGTCATAGACTCAAGAAAAGAGAGAAAATCAGAGAAAAGAAGAGTCTAGGCACCGTCCGGCGGTACACCCCTGGCGTCGGGTGGTCAAACGGGAGGAGAAGACACCAGTATTGGGCGCCGGGCGGCAAACCCCTGCCTCCGGGCGGTTTTGCGACACGAGGGAAACCGCCGGGCGGTAGACCTCTACCGCCGGACGGTGGTGCGATTCAAGGTCCACCGCCGAGCGGCAAAGTCTGGGCTTGGGCCTATTTTTCTGCTGCGCTTCTCACCTATAAATAG 1353 0.4605 MILLGIFSPSLQLLLSYAGGALEDHVMDTVGVICIDNEGHVTTGASSGGIALKVSGRVGLAAMYGAGCWASSKGPFGSPFMAGCCVSGAGEYLMKGFAARECCVSLSLYDIMGWTFDVDLLSFSSQSGPASACTKILRSVVEDGRQCVTDSSAGILVVQSDASLTDQGKSSRLKAVEIAAAYTSLSFGVGYFGSSMERPKEYKTTKQDCNRSIWGTDRSFKWIVSVTTGQIFRADEMKKCKVRPCTKYLGFVVLEGWAALEVSREGSSKAEDATMSMGYSVEQERCFTDLPLWRENYVKDCENDVRCEMLEANDERLLKSFENEGDTKIVNVHKAVMALQSWMKFLVGVKVKIGNKDEGHRLKKREKIREKKSLGTVRRYTPGVGWSNGRRRHQYWAPGGKPLPPGGFATRGKPPGGRPLPPDGGAIQGPPPSGKVWAWAYFSAALLTYK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00590 450 Gene3D (Glycosyl)asparaginase 29 242 - -
Vimu5g00590 450 FunFam Putative threonine aspartase isoform A 29 210 - -
Vimu5g00590 450 CDD Taspase1_like 24 200 IPR037464 GO:0004298
Vimu5g00590 450 Pfam Asparaginase 23 105 IPR000246 GO:0016787
Vimu5g00590 450 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 22 197 IPR029055 -
Vimu5g00590 450 MobiDBLite consensus disorder prediction 396 431 - -
Vimu5g00590 450 PANTHER L-ASPARAGINASE 24 206 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00590 Vimu-Chr5 6410428 6415611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00590 15 200 Miscellaneous Gene Families AT4G00590 62.766 1.11e-72 232