Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04858 ATGATATACCTTCTTTTACAGACTGCAGCTAAGAATGAGGAAGAGGAGTTCAACACTGGACCACTGTCTGTACTGATGATGAGTGTTAAAAATAATACCCAGGTATTGATAAACTGTCGGAACAACAAAAAACTTCTTGGTCGTGTTAGAGCTTTTGATAGGCACTGCAACATGGTTCTTGAAAATGTCAGGGAGATGTGGACAGAGGTGCCCAAGACTGGTAAAGGAAAGAAGAAGGCCCAGCCAGTGAACAAGGATAGATTCATCAGCAAAATGTTCCTCCGTGGAGATTCCGTTATCATTGTTCTTAGGAACCCTAAATGA 324 0.4167 MIYLLLQTAAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04858 107 Pfam LSM domain 28 102 IPR001163 -
Vimu11g04858 107 FunFam Small nuclear ribonucleoprotein Sm D2 15 107 - -
Vimu11g04858 107 SMART Sm3 25 104 IPR001163 -
Vimu11g04858 107 Gene3D - 15 107 - -
Vimu11g04858 107 ProSiteProfiles Sm domain profile. 22 107 IPR047575 GO:0003723
Vimu11g04858 107 SUPERFAMILY Sm-like ribonucleoproteins 20 105 IPR010920 -
Vimu11g04858 107 CDD Sm_D2 17 106 IPR027248 GO:0008380|GO:0030532
Vimu11g04858 107 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 8 107 IPR027248 GO:0008380|GO:0030532
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04858 Vimu-Chr11 68382956 68383508 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04858 11 68382956 68383508 Vimu11g04858 11 68382956 68383508 ECH