Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04835 ATGGCTATGGCAAAAGAGAAAGAGGAAGATGAAGAGGAGGTTCAGACCTGTGGGAAGAGGTTGAAATGCATGAGGAATGATGAAGAAGATGATAATGGTGTTGATGAAGAAGAGAGCGAGCTTCCTCTGAAACCAGGGATTTTCTTCTACCCGACAACCCCAACTTCCTTTGTTGTCTCTGATGCTCTTGAACCTGATTTTCCGGTCATATATGTCAACAAGGTCTTTGAAATCTCCACTGGATACCGTGCCGACGAGGCCCTCGGTCGCAACTGGTTAGAACTTTCTTCCATTTCTCCCTCTTTTTTGTGCAAATTCCGACCCCTTAACATCTGGGGTTTTTCTCTTTTGTGCATTTGA 360 0.4472 MAMAKEKEEDEEEVQTCGKRLKCMRNDEEDDNGVDEEESELPLKPGIFFYPTTPTSFVVSDALEPDFPVIYVNKVFEISTGYRADEALGRNWLELSSISPSFLCKFRPLNIWGFSLLCI 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04835 119 Gene3D PAS domain 50 107 - -
Vimu11g04835 119 SUPERFAMILY PYP-like sensor domain (PAS domain) 63 95 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04835 Vimu-Chr11 68251887 68252246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04835 23 107 AGC Kinase Gene Family AT3G45780 34.783 2.64e-07 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04835 11 68251887 68252246 Vimu11g04835 11 68251887 68252246 ECH