Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04833 ATGGCGACGATGACGAGCTTGATCGGTCTCATCAATAAGATCCAACGAGCCTGCACCGTTTTAGGAGATTACGGCGGCGAGGGTTTATCGCTTTGGGAAGCTCTTCCATCCGTCGCCGTCGTCGGTGGCCAGAGTTCGGGAAAGTCGTCGGTGCTTGAAAGCGTGGTCGGAAGAGATTTTCTGCCTCGTGGATCTGGTGATTCTTACTCTCTTTCTTACCATCTTCTGCTCTCGTTCGCTACTTTACGAGATCTCTCTAGCAATGTTGTTCATGAAGCAGTACTACTAATATATATTTATATATATTACAAGAAATGGCGCCTTGCGGAGTACTGGTTACTAACTGTGAAATCAAAAACAATTAAGCAAAAGTGGTCACTGTTTTTTAGTATTGTTACACGGAGGCCATTAGTGCTGCAACTTCACAAGACAGACAATGGGACGCAGGAGTATGCGGAGTTTCTTCATTTACCGAGAAAGAGATTCACTGACTTTGCTGCTGTGAGGAAGGAAATAGCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATTTCTAACATTCCAATTCATCTCAGCATTTATTCTCCCAATGTCGTAAACTTAACCCTCATAGATCTTCCTGGGCTGACAAAGGTTGCAGTAGAGGGACAGCAAGAGAGTATTGTTCAAGATATTGAAAACATGGTCCGCTCTTATGTTGAAAAGCCAAATTGCATTATCTTAGCTATCTCTCCTGCAAATCAAGATATTGCCACATCAGATGCCATAAAAATTGCACGAGAAGTTGACCCTTCAGGTGAAAGAACGTTTGGTGTTGTTACCAAACTTGATCTTATGGATAAAGGAACTAATGCGGTTGATGTACTTGAGGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTGAACCGATCACAAGCTGATATTAATCGAAATGTTGACATGATTGCTGCTCGTAGGAAGGAGCGTGAATATTTTGAGACAAGTCCTGAATATGGACATTTGGCACATAAAATGGGATCAGAATATCTTGCTAAGCTTTTATCTCAGCATTTGGAGCAAGTTATCAGACAGAAAATACCAAGTATCATTGCCTTAATAAATAAGACTATTGACGAGCTAAATGCCGAGTTGGACCGAATTGGCAGACCAATTGCTGTGGATTCAGGGGCCCAACTATACACTATTTTAGAGATGTGTCGTGCATTTGATAAAGTATTTAAAGAGCACCTGGAGGGAGGTCGTCCTGGTGGGGACCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTTTAAAAAAGCTTCCTTTTGATCGCCATCTTTCCCTGAAAAATGTCCAGAGGGTTGTCACTGAAGCTGATGGGTATCAGCCCCATCTAATTGCTCCAGAGCAGGGTTACAGAAGACTCATTGAAGGATCTATAGGCTATTTCAAAGGCCCAGCCGAAGCCTCCGTGGATGCTGTTCACTTTGTTTTAAAGGAACTTGTACGGAAATCAATTGCAGAAACTGAGGAACTAAAAAGATTTCCAACACTTTCAAATGATATAGCAACTGCTGCGAATGAAGCTCTGGAAAAATTCCGAGAAGAAAGCAGGAAGACAGTTACACGGTTGGTTGATATGGAGTCTAGCTATCTAACCGTGGAGTTTTTCAGGAAGATTCATTTTGAACCAGAAAAGAATCCAAATGGACCACCAAATCCAAATCGGAATGGTCCCCCAAATATGGACAGTTTTACTGACAATCACCTGCGCAAAATTGGAACAAATGTAAGTTCCTATATCAATATGGTTTGCGATACACTTAAGAATACCATACCCAAGGCTGTGGTTCATTGTCAAGTCAGAGAGGCTAAGCGATCTTTGCTGAACCACTTTTACGTTCAAGTTGGGAGGAAGGAGAAGGAAAAATTGGGTGCCATGTTGGATGAGGATCCAGCCCTTATGGAAAGGAGAAATCAAATAGCCAAAAGGCTTGAATTATACAAGCAAGCTAGGGATGACATTGACTCGGTGGCTTGGAAATAA 2046 0.4228 MATMTSLIGLINKIQRACTVLGDYGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGDSYSLSYHLLLSFATLRDLSSNVVHEAVLLIYIYIYYKKWRLAEYWLLTVKSKTIKQKWSLFFSIVTRRPLVLQLHKTDNGTQEYAEFLHLPRKRFTDFAAVRKEIADETDRITGKTKQISNIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQQESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINRNVDMIAARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLEGGRPGGDRIYGVFDHQLPAALKKLPFDRHLSLKNVQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLSNDIATAANEALEKFREESRKTVTRLVDMESSYLTVEFFRKIHFEPEKNPNGPPNPNRNGPPNMDSFTDNHLRKIGTNVSSYINMVCDTLKNTIPKAVVHCQVREAKRSLLNHFYVQVGRKEKEKLGAMLDEDPALMERRNQIAKRLELYKQARDDIDSVAWK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04833 681 PANTHER DYNAMIN 131 678 IPR022812 -
Vimu11g04833 681 ProSiteProfiles GED domain profile. 590 681 IPR020850 -
Vimu11g04833 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 66 IPR027417 -
Vimu11g04833 681 PRINTS Dynamin signature 60 77 IPR022812 -
Vimu11g04833 681 PRINTS Dynamin signature 35 53 IPR022812 -
Vimu11g04833 681 Gene3D Dynamin, middle domain 398 658 - -
Vimu11g04833 681 Pfam Dynamin family 131 277 IPR045063 -
Vimu11g04833 681 Pfam Dynamin family 38 66 IPR045063 -
Vimu11g04833 681 SMART GED_2 585 678 IPR003130 GO:0003924|GO:0005525
Vimu11g04833 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 374 IPR027417 -
Vimu11g04833 681 Pfam Dynamin GTPase effector domain 588 678 IPR003130 GO:0003924|GO:0005525
Vimu11g04833 681 MobiDBLite consensus disorder prediction 563 585 - -
Vimu11g04833 681 CDD DLP_1 35 365 IPR001401 GO:0003924|GO:0005525
Vimu11g04833 681 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 365 IPR030381 GO:0005525
Vimu11g04833 681 Gene3D - 129 374 IPR027417 -
Vimu11g04833 681 SMART dynamin_3 4 316 IPR001401 GO:0003924|GO:0005525
Vimu11g04833 681 Pfam Dynamin central region 286 553 IPR000375 -
Vimu11g04833 681 FunFam Dynamin-related protein 1C 396 658 - -
Vimu11g04833 681 Gene3D - 4 72 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04833 Vimu-Chr11 68241384 68247420 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04833 11 68241384 68247420 Vimu11g04833 11 68241384 68247420 ECH