Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04826 ATGGCCGACGCTCTCTCGCTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGTAAAAATGCTGCACTTGATGTTTGTCCTCTGCGCCTTTTTTGCTGGATAGTGAAACAACTTGCTATTGCTGGGGATCATGATAAAATAACGGCGGTTATCAATTTGTTGACTACGGAATTTACCTATTCACCACAAGCTAATCACCGGAAGGGAGGATTGATAGGATTAGCAGCGGCAACGGTTGGGTTGACTTCTGAAGCAGCTCAACATCTTGAGCAAATTGTGCCTCCTGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGCGAAGCACTTTATAACATTGCCAAGGTTGTGAGAGGGGATTTTATTATTTTCTTCAATCAGATCTTTGATGCGCTATGCAAGCTTTCAGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCACCTCTTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTCATACCACTGTTGAGGGAGCGCATGAATGTTTTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTTTTGGACAGTGTCCCAGATATTGACATGCTGGGGTTTCTTCCCGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCGGAGTTTCTTCAAGAGATTAAAAACTCCCCATTGCTTAATCCTGTTATCTTGCTACTCTTGAAGTCTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGAGCTGGTTCTCCTGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATACTATGCTGACATTCTTGGAGCCATTTTACCTTGTATATCAGATAAAGAAGAGAAAATCAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAAGCTGACCCAGCTGAAGCTTTTGATGTAGGAGCCATCCTCTCGATTGCCAGGAGGCAATTATCTAGTGAATGGGAGGGTACTCGAATTGAAGCTTTGCACTGGATGTTAACCCTTTTAAACAAATATCGTAACGAGGTTTTGCAATATCTGAATGACATATTTGACACCCTGCTCAAAGCACTTTCGGATCCATCTGATCAGGTTGTTCTTCTTGTTCTGGATGTTCATGCATGCATAGCAAAAGATCCTCAGCATTTTCGGCAACTTGTTGTTTTCCTGATGCACAATTTTCGGGTAGACAATTCCCTTTTGGAGAAACGTGGTGCTTTGATAATTCGCCGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTATCGTGAACTTTCCACTATACTAGAAGGGGAGTCTGACCTGGATTTTGCTTCAATTATGGTCCAGGCTCTAAATTTGATATTACTCACATCATCCGAACTGTCCGAGATTCGATATCTTTTGAAGCAATCACTGGTTGATCCTGCTGGGAAGGATTTATATACTTACCAACATGCGAGTGCTGTGATCCAGTCTCTGGTTGAAGAGGATGTGAATGTCAAATTCTTAGTCCAGCTTGATAAATTGATTCGGTTGCTGGAAACTCCAATATTTGCTTATCTAAGATTGCAGCTTCTAGAACCCGGAAGATATCCGTGGCTGTTTAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATTCTCAAAACTCGCTTAAAAGCCGTGCCATCATATTCCTTCAATGGTGAGCAATTGAAAAAAACATCCTCAGGGAATCCCTATAATTTTCTCCATAACATGTCTGGTGGATCCCAAATCAATGAGGATGGTGAAGTAGCTTTGGATCGTGGGAACTCACTTAATGGAATAAATTTTGCTGCAAGGTTACAACAGTTTCAGCAAATGCAGCACCAGCATCGTGTGCATTTGAAAACACAGACGTTCAAAAATTCCTCCTCCTCATCGAAGGTGGCTACCCTATTCATTGAGGCACAGAGACATGAAGAACCCAAGCAACCTCAGTTGAGTGAGGTTAATGCTGTTGCTCCTTCAAGATCATCTAAAAGAGCCCAGGGTAGCTAG 2166 0.4247 MADALSLIPAAVLRNLADKLYEKRKNAALDVCPLRLFCWIVKQLAIAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPLLNPVILLLLKSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRALKADPAEAFDVGAILSIARRQLSSEWEGTRIEALHWMLTLLNKYRNEVLQYLNDIFDTLLKALSDPSDQVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRYLLKQSLVDPAGKDLYTYQHASAVIQSLVEEDVNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYNFLHNMSGGSQINEDGEVALDRGNSLNGINFAARLQQFQQMQHQHRVHLKTQTFKNSSSSSKVATLFIEAQRHEEPKQPQLSEVNAVAPSRSSKRAQGS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04826 721 Gene3D - 1 264 IPR011989 -
Vimu11g04826 721 MobiDBLite consensus disorder prediction 691 721 - -
Vimu11g04826 721 FunFam protein VAC14 homolog isoform X1 265 427 - -
Vimu11g04826 721 Pfam Vacuolar protein 14 C-terminal Fig4p binding 523 603 IPR021841 -
Vimu11g04826 721 Pfam Vacuolar protein 14 C-terminal Fig4p binding 446 512 IPR021841 -
Vimu11g04826 721 Gene3D - 265 434 IPR011989 -
Vimu11g04826 721 PANTHER TAX1 BINDING PROTEIN-RELATED 7 682 IPR026825 GO:0006661|GO:0070772
Vimu11g04826 721 MobiDBLite consensus disorder prediction 705 721 - -
Vimu11g04826 721 Pfam Vacuolar 14 Fab1-binding region 71 167 - -
Vimu11g04826 721 ProSiteProfiles HEAT repeat profile. 98 133 IPR021133 -
Vimu11g04826 721 SUPERFAMILY ARM repeat 4 555 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04826 Vimu-Chr11 68202562 68210483 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04826 11 68202562 68210483 Vimu11g04826 11 68202562 68210483 ECH