Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04820 ATGGCCTGCTTGGTATCTCGCTCGGGAAGGGAGTTGCAGAGGTACAACAACATGGGTGGCCGCCAAGTTGTTGGGTGCATACCTTATAGATATAAAGAAGACGTAGATGGTAACATGAGTGACGAATTGGAAGTACTGGTCGTTAGTTCTCAGAAAGGTCAAGGATTAATGTTCCCTAAGGGAGGATGGGAACTTGATGAATCTGTAGAAGAAGCAGCTTGTAGGGAATCTCTTGAAGAAGCAGGAGTATTGGGAATTATTGAGCATGAATTGGGGCAGTGGTATTTCATAAGCAAAAGACATGGCATATACTATGAAGGACACATGTTTCCCATGTTTGTCAAGGAACAGCTTGACACGTGGCCGGAGAAACATTTACGGAGAAGAATTTGGATGAGTGTTGGTGAAGCTAGAGAAGTTTGTCAGCATTGGTGGATGAAGGAGGCATTGGATATATTGGTTGAAAGAATAATGGTGTCTTCAGAACAAGGAAAAAGAGATATGGTTTTGGATGTTCTTTAG 522 0.4272 MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDVDGNMSDELEVLVVSSQKGQGLMFPKGGWELDESVEEAACRESLEEAGVLGIIEHELGQWYFISKRHGIYYEGHMFPMFVKEQLDTWPEKHLRRRIWMSVGEAREVCQHWWMKEALDILVERIMVSSEQGKRDMVLDVL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04820 173 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 157 - -
Vimu11g04820 173 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Vimu11g04820 173 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Vimu11g04820 173 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Vimu11g04820 173 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Vimu11g04820 173 SUPERFAMILY Nudix 14 156 IPR015797 -
Vimu11g04820 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
Vimu11g04820 173 Pfam NUDIX domain 43 139 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04820 Vimu-Chr11 68174513 68175602 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04820 11 68174513 68175602 Vimu11g04820 11 68174513 68175602 ECH