Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04813 ATGCATCGTCTCCTTCTCCTCTTCGTCTTCTCCGTCCTCGCAACCCCCTCTTCCTCCGCCATCGACACCTTCGTCTTCGGCGGTTGCTCCCAGCCCAAGTACACGCCGGGTTCGCCCTACGAGAGCACCGTCAACTCGCTCCTCACCTCGCTCATCAACTCGGCCTCCTTCGCCAACTATAACAACTTCACCCTTGCCGCCGCCTCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCAACAACGACCAGTGTTCGCGCTGCGTGGCGCGTGCGGTCACTCAGCTCGGCACGCTCTGCTTCGCCTCCTGCGGCGGCGCGTTGCAGCTCGAGGGCTGTTTCGTGAAGTACGACAATGCGACGTTTGTCGGGGTGGAGGACAAGACGGTGGTGACCAAGAAATGTGGACCCTCCGTTGGGTTGACCTCGGACGCGTTGACTCGGAGGGACGCTGTGCTGGCGTATTTGCAGACGCCCGATGGGACTTACAAGACCTTCAGGACCAGCGCTTATGGGGATTTTCAGGGTGTGGCGCAGTGCACCGGTGACTTGAGTCCCACCGAGTGCCAGGATTGTCTCTCCAGTGCCATCCAACGGCTCAAGACCGACTGTGGTCCCTCCCCCTGGGCAGAGATTTACCTCGCCAAATGCTACGCGCGCTACTCCCAGGGTGGCTCTCACTCGCACTCTAATAATAACGGTAAGCGTAAAAACTGCTCCACCGCGCGCGGTGATGACAGCAATCACAATGATGATGAGATCGAGAAGACACTCGCCATACTGATTGGACTCATTGCCGGTGTTGCTCTGATCATCGTTTTCCTTTCCTTCTTGTCCAAAGTGTGCGAAAAGCAGAAAGGTATGGTTCCTGTTCCTATGCATCTAACTGTATTAGTATATGCTCGTGCTCGTGCTCGTGCAGCTGCAGGTGTTAATTTATGA 951 0.572 MHRLLLLFVFSVLATPSSSAIDTFVFGGCSQPKYTPGSPYESTVNSLLTSLINSASFANYNNFTLAAASSDTVYGLFQCRGDLNNDQCSRCVARAVTQLGTLCFASCGGALQLEGCFVKYDNATFVGVEDKTVVTKKCGPSVGLTSDALTRRDAVLAYLQTPDGTYKTFRTSAYGDFQGVAQCTGDLSPTECQDCLSSAIQRLKTDCGPSPWAEIYLAKCYARYSQGGSHSHSNNNGKRKNCSTARGDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKQKGMVPVPMHLTVLVYARARARAAAGVNL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04813 316 MobiDBLite consensus disorder prediction 226 241 - -
Vimu11g04813 316 FunFam cysteine-rich repeat secretory protein 3 21 125 - -
Vimu11g04813 316 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 285 - -
Vimu11g04813 316 MobiDBLite consensus disorder prediction 226 252 - -
Vimu11g04813 316 FunFam Cysteine-rich repeat secretory protein 60 146 227 - -
Vimu11g04813 316 ProSiteProfiles Gnk2-homologous domain profile. 130 229 IPR002902 -
Vimu11g04813 316 Pfam Salt stress response/antifungal 168 226 IPR002902 -
Vimu11g04813 316 Pfam Salt stress response/antifungal 29 122 IPR002902 -
Vimu11g04813 316 Gene3D - 147 227 IPR038408 -
Vimu11g04813 316 Gene3D - 21 125 IPR038408 -
Vimu11g04813 316 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04813 Vimu-Chr11 68114054 68116618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04813 4 225 Receptor kinase-like Gene Family AT4G05200 25.957 2.27e-14 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04813 11 68114054 68116618 Vimu11g04813 11 68114054 68116618 ECH