Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01726 ATGAAGTCATACGGTACCACAATTTTTGCACAATTATTTGGTCTTCTCGCTCTCATCCTCTTACTTGTTTGGTTGCTGCATTATCGTGAGGGCATTGAATATGATTCCGACGATCCATTTCGCGTTTTCAATGTTCACCCCTTTATGATGTTCTTCGGCTTCATTTTCCTTATTGGTCAAGCTATACTAGCATATCAAACGGTGCCAGGAACGCATGAAACGCAGAAGATTGTTCACTTGATGCTGCATCTAATTGCTATAATTCTTGGGATTGTTGGTTTGTGCGCGGTTTTCAAGTTCCATGATATGATGAACTTGACAGACGTATACAGCCTCCATTCATGGATTGGCATTGGCACCTTTTGCTTGTTTGGCTTGCAGTGGCTTTTGGGGTTGGTGTTCATGCTTCAAGGATCTCAACAATCAAGGGTTTCAATGGCTCCATGGCACGTAGCAGGTGGCAGAGCACTATTTTTCATGGCAATTTGTGCTGCACTAACAGGGTTGATGGAGAAGTACACTTCTTCGAAATTACTGCCACACCAGAGAGAATCTCATTTGATCAACTTCACAGGTCTAGCAATTCTCTTGTTTGGAGTTTTTGTCGACATGGCTGTTGGTTTGGCCCGTTTTCCCTAA 639 0.4304 MKSYGTTIFAQLFGLLALILLLVWLLHYREGIEYDSDDPFRVFNVHPFMMFFGFIFLIGQAILAYQTVPGTHETQKIVHLMLHLIAIILGIVGLCAVFKFHDMMNLTDVYSLHSWIGIGTFCLFGLQWLLGLVFMLQGSQQSRVSMAPWHVAGGRALFFMAICAALTGLMEKYTSSKLLPHQRESHLINFTGLAILLFGVFVDMAVGLARFP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01726 212 PANTHER CYTOCHROME B561-RELATED 6 206 IPR043205 GO:0016491
Vimu11g01726 212 CDD Cyt_b561_ACYB-1_like 36 174 - -
Vimu11g01726 212 FunFam Probable transmembrane ascorbate ferrireductase 3 1 210 - -
Vimu11g01726 212 ProSiteProfiles Cytochrome b561 domain profile. 9 207 IPR006593 -
Vimu11g01726 212 SMART 561_7 45 169 IPR006593 -
Vimu11g01726 212 Gene3D - 1 209 - -
Vimu11g01726 212 Pfam Eukaryotic cytochrome b561 45 173 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01726 Vimu-Chr11 22635638 22637095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01726 6 211 Chloroplast and Mitochondria Gene Families AT1G14730 57.692 2.95e-83 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01726 11 22635638 22637095 Vimu11g01726 11 22635638 22637095 ECH