Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01684 ATGCCCATACATACCCTATTTTTTAGCACTCTTTCTCTCTCTCCATTCCTATTGCGACTCTCTTCTCTCTCCTCTCTCTTCGCCTTTCTCTTTCTCTCTCTTTCAGATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGCAAACCCTAAAGACCGTTTGCACCCACCAATTGCCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACCAAGCCGTATCTGCCTGCTCGTGATCCAGCTGTCTTAATGGGTGCTAATGGAACTTTTCACCCTAGAGATTGCGTTGTTTCCGAAGCACCAATGCAGTTGAACTATGTCAGAGATAATTGGACAAGCCAAAGGGATAGGTATTTCAGTATGCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCTGAAACATCAGTAGCTCCCAACTTGCAAATTATACAACCACCTGATACATCCAGAGATGAGAAAGTGGATAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGTCAGTCGAAGAAAAGGCAGACTAAGGGTGCTCTGACGACCCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATGGCAATGTTCCAGTTCAACGTGTGAAGCCCCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTGCCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAGTGTTACCGTTGGGGTTGTGGAGGTTGGCAATCGGCCTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCTAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCGTTTAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGATATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACATGGCACGAACAAGTTTGTTACTATCAGGTAG 1017 0.4543 MPIHTLFFSTLSLSPFLLRLSSLSSLFAFLFLSLSDFCLSHLSLSGRANPKDRLHPPIAMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPAVLMGANGTFHPRDCVVSEAPMQLNYVRDNWTSQRDRYFSMQQPTNPNYAVLPETSVAPNLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPKAKKPRKPKDNGNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01684 338 PANTHER - 60 338 IPR010409 -
Vimu11g01684 338 SMART GAGA_bind_2 60 338 IPR010409 -
Vimu11g01684 338 Pfam GAGA binding protein-like family 60 338 IPR010409 -
Vimu11g01684 338 MobiDBLite consensus disorder prediction 186 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01684 Vimu-Chr11 21577832 21579473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01684 60 338 BBR or BPC Transcription factor family AT2G01930 55.705 8.55e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vimu11g01684 GAGA_bind 4.8e-103 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01684 11 21577832 21579473 Vimu11g01684 11 21577832 21579473 ECH