Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04080 ATGTCTGTGCCGCCGGTGCAGTGTGTATACGTAACAGAGGACTGCGTTCGCGAATGGAAGACTGGTAACTCTTCTCTCAAGGTCTCTCAACCTGTTCCAATGCTTCGCTTTCTCTACGAGCTCGCCTGGACCATGGTTCGGGGTGAATTGCCATTTCCGAAGTGTAAAGTAGCGTTAGATTCTGTCATATTCTCGGATAAAGCTTCAGCTGAGAAAGTAGCCTCAAATTTTGCAGACATAGTGAGCCAGATGGCTCAAGATCTTACATTGTCTGGAGAGTTTCGTTCTCGTCTCATCAAACTGGCAAGATGGCTTGTAGAATCTGAATTGGTTCCAGTTAGGTTACTTCAAGAACGCTGCGAGGAAGAATTTTTGGGGGAGGCTGAATTTATCAAAATTAAGGCTCAGGAGCTTAAGGGAAAAGAGGTCAGAGTTAATACACGACTTCTTTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGCGAGGGCTATGCCAAACTGGTCACTCTACTTTGTCGGGACTCTGAAGCGCCGACTCAAAAAGGATCTGCATCAACAATTGGCATTATTAAGTCATTGATTGGCCATTTTGATTTGGATCCAAACCGTGTTTTTGATATTGTACTTGAGTGTTTTGAACTTCAGCCTGATAATGAAGTGTTTATAGAGCTGATTCCTATTTTTCCTAAGTCTCATGCTTCACAGATTCTTGGGTTTAAATTTCAATATTATCAGCGCATGGAAGTCAGTAATACTGTACCGTATGGGCTTTATAGACTTGCAGCCTTGCTGGTGAAGCAAGACTTTATTGATCTTGATAGCATATATGCTCATTTACTCCCTAAGAATGAAGAAGCATTTGAGCATTATGGCACTTTCTCTTCCAAGCGCCTTGATGAGGCTAATAAAATTGGAAAAATAAACCTTGCTGCTACTGGAAAGGATCTAATGGATGAGGAGAAAACAGGGGGGGATGTCACTATTGATCTTTTTGCTGCTTTAGCCGTCGAAACTGATGCAGTTGAGGAGCGGAAATCCGAACTTCAAAATAGTCAAACTTTGGGCTTGCTTACTGGCTTTCTTTCTGTGGATGACTGGTATCATGCACATGTACTATTTGAACGTCTCTCACCTCTCAATCCAGTGGAACATATCCAAATATGTGATAATTTGTTTAGGCTTATTGAGAAGTCAATTTCTTCTCCATATGATGTTATTCGTCAAGCACATTTTCAAAATCCTGGATCATCCACTGGAGGCAGCACTGATTCTATGGACGTAGATAACCCTTCAGGACACCATTCTTTCATAGATCTTCCAAAGGATCTTTTTCAGATGCTTTCCTGTACTGGACCTTTTCTCTACCGAGATACTATGCTGTTACAGAAGGTTTCTAGGGTTTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTAAGTCATGGCGACAGTGCCTTGAATTCTGAATTTCATGTTATTGGAAATCCCCACCTGCATTTGAAGGAAGCAAAGCTAAGGGTGGAGGATGCTTTGGGAGCTTGTCTACTACCTTCTCTACAGTTGGTTCCTGCTAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTTCTTCCTTATGAGGCACGCTATCGTTTATACGGTGAATGGGAAAAAGACGATGATCGCTATCCTATGCTGTTGGCTGCCAGACAAACTGCCAAGTTAGACACTAGACGTATTTTGAAGCGGTTGGCAAAGGAAAATTTAAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCTATGACTGTCCTTCGAACAATTGTTCACCAGATTGAGGCATACAGAGACATGATTACTCCTGTGGTGGACGCGTTTAAGTATTTGACTCAGCTTGAATATGATATATTGGAATATGTTGTTATTGAGCGATTGGCACTTGGTGGACGTGATAAGTTGAAGGATGATGGGCTTAATTTGTCAGACTGGCTTCAATCTCTAGCTTCATTTTGGGGTCACCTATGTAAGAAGTACCCATCAATGGAGTTGCGGGGCCTTTTCCAGTATCTTGTGAACCAGTTAAAAAGGGGACAGGGAATTGAGCTTGTTCTACTGCAGGAGCTTATCCAACAAATGGCAAATGTTCAATACACAGAGAACTTGACTGAGGAACAGCTGGATTCTATGGCTGGGAGTGAGACTCTGAAATATCAAGCAACTTCCTTTGGGATGACTCGAAATAATAAGGCATTGATAAAGTCAACTAGCAGGCTTAGAGATGCATTACTTCCTAAAGATGAACCGAAGTTGGCAACCCCCCTCTTGCTTCTTCTTGCTCAGCATCGATCTCTGGTTCTCGTCAATGCAGATGCACCCTACATTAAGATGGTCAGTGAACAGTTTGATAGATGCCATGGAACTCTTCTTCAATATGTCGATTTTCTAGGCAGTGCAGTCACACCAGGATCAAATTATGCTATTCTTATTCCCTCACTTGATGACCTGGTCCATCTTTACCACTTGGATCCCGAGGTTGCTTTCTTGATATACCGCCCTGTTATGAGACTTTTCAAGTCTCAAAGGACTCCCAATGTATGCTGGCCCTTGGATGATAGAAATGCTGCAAGTGATTCATCTACGAACTTTGAGTCTGATACTGCAGATCATCTTGGTAGCATGGTTCTAGATACTGGCTCCAACAAAAATCCGATTAGTTGGTCATATCTTATTGGTACTGTTAAAACTATGTTGCCTTCAAAAGCATGGAATAGCCTATCTCCTGATCTTTATGCAACATTTTGGGGTCTCACATTATATGATCTGTACGTTCCGAAAAATCGTTATGAGTCAGAAATAGCCAAGCTTCATGCTAGTCTTAAATCTTTGGAGGAGATTTCTGACAATTCAAGCTCAGCGATCACTAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGCCTGATTAGTGAACTGCATAAACATGAAGAAAATGTCGCATCTGTCAGCAGACGGCTCTCTTATGCAAAAGACACATGGTTAAGTTCCTGTCCTGATACCTTAAAGATTAACATGGAGTTTCTTCAGCGCTGTATATTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTACACAAACTTCATTCCCTTGGAACCCCCTTTTTTAACACAGTCAACCACATTGATGTTCTTATTTGTAAGACCCTTCAACCAATGATATGCTGCTGCACTGAATATGAGGTTGGTAGGCTTGGCAGGTTTCTATACGAGACTTTGAAGATCGCTTACCATTGGAAGAAAGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCGGGATTTGCTGTTTATTATCGATATCCAAATAGCCAGCGAGTTACATATGGACAGTTCATTAAGGTACACTGGAAATGGAGCCAAAGAATCACACGGTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAGATTAGAAATGCTCTTATAATGTTGACTAAAATTTCTAGTGTTTTCCCCGTTACACGGAAGAGTGGGATAAACCTTGAAAAGCGGGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTAGCAGCAGCACTGGCTGCTAGGAAGCCTTCTTGGGTCACCGATGAAGAATTTAGTATGGGTTATCTTGAGTTGAAGCCGGCACCATCTATGGCTAAATCTGCTGCGGGAAATTCTGCAGCTGTACAAAGTGGAACAGGTCTTCATGTTTCTCAAACTGAATCTGCCAGTGGGAAACATCTGGACTCTGGAAACACAGTCAAAGACCAGACAACAAAAATAAAAACTGCAGATGGCAAGTCAGAAAAAACTGAAAATATTACAGTGACAAAATCTGATTCTGGCCAGGTAAAACTCAAGGGTAGTTCAATGGTGAATGGATTGGATGCTCAATCTTCTCTACCCTCACCTGCTGGACAATCTGGGGCAGTAAAATCCCTAGAAAACTCAAAGCAAGTGGAAGAATCAATAAGTAGGGCACCAGATGAACACGTTACAAGAAATGTTGAGTCAAAAATCTCTGCAAAACGTTCAGTGGCTGCTGGTTCACTTTTGAAGCCATCAAAACAAGATCCTTTGAAAGAAGATGGTAGATCTGGTAAAACTGTTACCAGAACTTCTGGTTCCTCAAGCAGTGACAAGGATCTTCTGGCCCATGCATCAGATGGAAGGCATACTGGAGCAAACGTCTCTTCTTCAGTCGGCGCTAATGGTAACAGTGTTTTAGGTTCTGCAAAGGGCTTGACTCCATTGGCAAAAAATTCATTTGATGGTTCTGGTATTGAATCAAAGGCAGAGTTTGGAGCTGCCAAGTCTTCGGTGGCAAAGGATGATGGAAATGATATTGCTGACTTAACAAGAGGATCCTCTTCTCGTGTAGTCCATTCCCCTAGGCATGATAACACGGCTACCTCGAAGTCTAGTGATAAAAGTCAGAAGCGAGCCGGTTCTGTTGATGAATTAGACAGACTAGGTAAACGGAGGAAAGGGGATGTTGATCTAAGAGATTTGGAGAGTGAAGTTCGATTCTCTGAAAGAGAGAAGCTGATGGATCATCGACTGGTTGATGATAAAGTGGGACCAGATGAACTTGGTATGTACAGAGCCGGTGATAAGACATTGGAAAGGCCAAAAGAAAAAGGCATTGAAAGATATGAAAGGGAACACAGGGAGAGATTGGACCGACCGGACAAGTCCCGTAGTGATGACTTTGTTGTAGAAAAATCTAGGGACAGGTCAATAGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGAGTTTTAATAGACTCCCTGACAAGGCTAAGGATGACAGAAGGGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCCACAAGGCATTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAAGAACAGAGAAGGTCTGAAGAGACTGTGATTTTGCAGGAGGATCCTAAACGTAGAAAAGATGATGATTTTCGAGATCGGAAGCGTGAAGAAATGAAGGTAGAGGAGAGGGAAAGAGAGAAAGCAAGCATTCCTAAAGAAGATTTGGATTTAAATGCTGCAACCAAGAGACGTAAACTTAAGAGGGAACATATATCAACTATGGAACCCGGGGAGTACTCACCAGTTGCTCCCGCGCCTCCTCCCCCTAATATTGGTATGTCACAAGCATATGATGCAAGAGACAGAAAGGGTCCAATGATCCAGCATGCTGGTTACATAGATGAACCAAATCTTAGGATTCATGGTAAAGAGGTCGCCAACAAGCTGAATCGTCGTGATATAGATCCCTTATATGACCGGGAGTGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGGCATCGGAAGTAA 5445 0.4239 MSVPPVQCVYVTEDCVREWKTGNSSLKVSQPVPMLRFLYELAWTMVRGELPFPKCKVALDSVIFSDKASAEKVASNFADIVSQMAQDLTLSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKGSASTIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNEVFIELIPIFPKSHASQILGFKFQYYQRMEVSNTVPYGLYRLAALLVKQDFIDLDSIYAHLLPKNEEAFEHYGTFSSKRLDEANKIGKINLAATGKDLMDEEKTGGDVTIDLFAALAVETDAVEERKSELQNSQTLGLLTGFLSVDDWYHAHVLFERLSPLNPVEHIQICDNLFRLIEKSISSPYDVIRQAHFQNPGSSTGGSTDSMDVDNPSGHHSFIDLPKDLFQMLSCTGPFLYRDTMLLQKVSRVLRGYYLSALELVSHGDSALNSEFHVIGNPHLHLKEAKLRVEDALGACLLPSLQLVPANPAVGQEIWELMSLLPYEARYRLYGEWEKDDDRYPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENLTEEQLDSMAGSETLKYQATSFGMTRNNKALIKSTSRLRDALLPKDEPKLATPLLLLLAQHRSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLDDLVHLYHLDPEVAFLIYRPVMRLFKSQRTPNVCWPLDDRNAASDSSTNFESDTADHLGSMVLDTGSNKNPISWSYLIGTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHASLKSLEEISDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVSRRLSYAKDTWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHKLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYETLKIAYHWKKDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFSMGYLELKPAPSMAKSAAGNSAAVQSGTGLHVSQTESASGKHLDSGNTVKDQTTKIKTADGKSEKTENITVTKSDSGQVKLKGSSMVNGLDAQSSLPSPAGQSGAVKSLENSKQVEESISRAPDEHVTRNVESKISAKRSVAAGSLLKPSKQDPLKEDGRSGKTVTRTSGSSSSDKDLLAHASDGRHTGANVSSSVGANGNSVLGSAKGLTPLAKNSFDGSGIESKAEFGAAKSSVAKDDGNDIADLTRGSSSRVVHSPRHDNTATSKSSDKSQKRAGSVDELDRLGKRRKGDVDLRDLESEVRFSEREKLMDHRLVDDKVGPDELGMYRAGDKTLERPKEKGIERYEREHRERLDRPDKSRSDDFVVEKSRDRSIERYGRERSVERMQERSFNRLPDKAKDDRRAGRRDEDADRRYGATRHSQRLSPRHEEKEQRRSEETVILQEDPKRRKDDDFRDRKREEMKVEEREREKASIPKEDLDLNAATKRRKLKREHISTMEPGEYSPVAPAPPPPNIGMSQAYDARDRKGPMIQHAGYIDEPNLRIHGKEVANKLNRRDIDPLYDREWDDEKRQRADQKRRHRK 1814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1300 1346 - -
Vifa6g04080 1814 Pfam Transcription- and export-related complex subunit 593 668 IPR021726 -
Vifa6g04080 1814 Coils Coil 973 1007 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1780 1814 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1494 1730 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1255 1428 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1347 1363 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1780 1806 - -
Vifa6g04080 1814 Pfam THO complex subunit 2 N-terminus 35 591 IPR032302 -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1476 1493 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1458 1754 - -
Vifa6g04080 1814 Pfam Transcription factor/nuclear export subunit protein 2 922 1216 IPR021418 -
Vifa6g04080 1814 PANTHER THO2 PROTEIN 5 1703 IPR040007 GO:0000347|GO:0006397|GO:0006406
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1394 1408 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1255 1284 - -
Vifa6g04080 1814 MobiDBLite consensus disorder prediction 1285 1299 - -
Vifa6g04080 1814 Coils Coil 945 965 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04080 6 1343579518 1343604232 Vifa6g04080 6 1343579518 1343604232 ECH