Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04049 ATGGGCGAAGGTATAGTTGAAAAAGCTCTGAAAAGCTTAGGAAAAGGCTTCGATTTAACGTCAGATTTCAGACTCAAATTCTGCAAAGGCGAAGAACGTTTGATTGTTCTCCATGAAAACGAGAAAAGAGAACTCGCAGTGCCAGGTTTTGGATCCATTCAAGATGTTTCTGTTGATATCAAATGCGATAAAGGAGACCGCACACGCTATCAATCTGATATCCTCACGTTTACGCAAATGTCAGAGTTGTTTAACAGGAAGAGTTCAATTCCTGGGAAAATTCCAAGTGGATATTTTAACAGTGTGTTTGGGTTTGATTATGGTTCATGGGCAAGTGAAGCAGCAAATACAAAGTGTTTAGGTCTTGATGGTTATTTGATAAAACTGTTCAATCTTCATATTGATCCATTTCCTCTTCTTCTTTCTAACAAAATTATTCAAGCTGTTCCTTCTTCATGGGATCCTCCTGCACTTGCAAGATTCATAGAGAACTTTGGTACTCACATCCTTGTGGGCCTTAGCATTGGAGGCAAAGATTTATTGCTAGTCAAGCAAGACGTGTCTTCCAACTTGGGACCATCAGAGCTCAAAATTCACTTGGATGAGCTTGGAGATCAGTTATTTAGTGGCACATGCAATTTCCTTCCTAAAAAGAAAGATCAGAAACATAAGATTCCGCCCGCTTTCGATGTATTTGGCCCACAAATCGCTGCCTTCAACGGCTCTACATCCGTGTGCGCAAAAGATGGAATAACAGTGATATGTGCAAAGAGAGGAGGGGATACACAAGTAAGCAGCCATAGTGAATGGCTTCTCACAGTTCCTAACAAACCAGATGCAATTGATTTTAGCTTCATTCCAATCACTTCTCTTCTTAAAGGTGCTCCTGGTAGGGGCTTCCTCTCCCATGCTATCAACCTCTATCTTAGATATAAGCCACCAATGTCAGATTTGCCATACTTTCTTGACTATCAAGCACACAAGCTTTGGGCTCCTGTTCACAATGATCTCCCTCTTGGTCCAAGTACAAACATCACAACTGTTTCACCTTTTCTCACACTCAACTTGATGGGTCCCAAACTTTATGTAAATACTGATAAGGTTACAGTTGGCAAAAGACCAATCACAGGAATGCGATTGTTTCTTGAAGGCATGAAATGCAACAGATTAGCCATACATGTAGAACATCTACTAAACACTCCAACAATGCTTAGCAATAAAATCGAGGACACGATAATATGGTCGGAAGAAATAAGTGATAATCGTTTCTTCGAAGCGATAAACGGGAAGAAATTTTCGCATGTATGTACCGCGCCAGTGAAATACAATCCTGACTGGACCACTGAAAAAAATGTTACATTCATTGTCACAGGAGCACAACTTCATGTGAAGAAACATGACACAAAGAATGTCCTTCATTTAAGGTTATTGTTCTCTAAGGTATCAAATTGTTTTGTTGTGAAATCAAATTGGACACAAGGCTCTTCTAAATTGTCTCAGAAATCTGGAATTTTCTCAGCATTAATAAGCACATCAATTTCTAATAAAGACCAAAAGAAATCAACAGTTGTTATGGATTCAAGTGTGTTTCCAACAGGGCCTCCAGTACCTGTACAGACACAAAAAATGTTGAAATTTGTGGACACATCACAGCTATGTAAAGGGCCACAAGATATTCCTGGTCATTGGTTGGTTACTGGGGCAAGATTGGTTATGGACAAAGGTAGGATATATTTGTGGGCTAAGTTCTCTTTGTTAAATACTGGCCTATGA 1773 0.3959 MGEGIVEKALKSLGKGFDLTSDFRLKFCKGEERLIVLHENEKRELAVPGFGSIQDVSVDIKCDKGDRTRYQSDILTFTQMSELFNRKSSIPGKIPSGYFNSVFGFDYGSWASEAANTKCLGLDGYLIKLFNLHIDPFPLLLSNKIIQAVPSSWDPPALARFIENFGTHILVGLSIGGKDLLLVKQDVSSNLGPSELKIHLDELGDQLFSGTCNFLPKKKDQKHKIPPAFDVFGPQIAAFNGSTSVCAKDGITVICAKRGGDTQVSSHSEWLLTVPNKPDAIDFSFIPITSLLKGAPGRGFLSHAINLYLRYKPPMSDLPYFLDYQAHKLWAPVHNDLPLGPSTNITTVSPFLTLNLMGPKLYVNTDKVTVGKRPITGMRLFLEGMKCNRLAIHVEHLLNTPTMLSNKIEDTIIWSEEISDNRFFEAINGKKFSHVCTAPVKYNPDWTTEKNVTFIVTGAQLHVKKHDTKNVLHLRLLFSKVSNCFVVKSNWTQGSSKLSQKSGIFSALISTSISNKDQKKSTVVMDSSVFPTGPPVPVQTQKMLKFVDTSQLCKGPQDIPGHWLVTGARLVMDKGRIYLWAKFSLLNTGL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04049 590 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 587 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vifa6g04049 590 Pfam MAC/Perforin domain 101 308 IPR020864 -
Vifa6g04049 590 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Vifa6g04049 590 SMART MACPF_8 117 310 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04049 Vifa-Chr6 1335187012 1335192250 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04049 6 1335187012 1335192250 Vifa6g04049 6 1335187012 1335192250 ECH