Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04039 ATGGCGGAATTTTCCGGTGACGTAGGAATGGAGGCGACGGTTGTGACGCCGACGCCGTTGACGGTTTCCGGATCGTTTAAAGAAGGGAAGAACTCGTCGAGGAGACGTCAGCATTCCATGAGGCCTAGTTTGGATGCGGATGAGTTCATGAACTTACTTCACGGTTCGGATCCAGTGAAATTGGAGCTTAATCGGCTTGAGAATGATGTTAGAGATAAGGATAGGGAATTATCAGAAGCTCAGGCGGAGATCAAAGCGTTGAAACACACTGAACGACTGAGAGAAAAAGCCGTTGAAGAGCTTACTGAAGAATTGTCTAAGGTTGATGGAAAGCTGAAGTTAACAGAAAATCTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAATGATGAAAAAAAAGCATCGATGGCAGCTCAGTTTGCAGCTGAAGCTACTCTCCGAAGGGTTCATGCTGCTCAGAAGGATGATGACATGCCTCCTATAGAAGCCATTCTAGCCCCTTTAGAGGCTGAACTCAAGCTTGCTCGGCAAGAGATTGCTAAACTTCAAGATGATAACAGAGCCTTAGATCGTCTTACGAAATCTAAAGAAGCAGCTCTTCTTGAAGCTGAAAGGACCGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTCCAAAATAAAAATCAAGAGCTAATGAAACAGATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGACAAAATGCTTAGACTAAAGGTGGCAGAGGTTGAAAAGCTGACACAAACTGTGAGAGAACTAGAAGAGGCTGTCCTTGCAGGGGGTGCAGCTGCAAATGCTGTGAGAGATTATCAACGAAAATTTCAAGAAATGAATGAAGAGAGAAAAACTCTTGATCGGGAGTTGGCTCGTGCCAAGGTAACAGCTAACAGAGTAGCTACAGTAGTGGCAAATGAATGGAAAGATGCTAATGACAAAGTGATGCCTGTCAAACAATGGCTTGAAGAGCGACGATTCTTACAGGGAGAGATGCAGCAACTTCGGGAAAAGCTTGCTACAGCTGACCGCACTGCAAAGTATGAAGCACAGTTAAAAGAAAAATATCAATTACGGCTTAAAGTGCTACAAGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGCACTTCAGAGGGAAAATGCGTTAGCAATGGGCCTTCTACTAGCAATGGGCCTTCCCGACGACTATCTCTTGGTGGAGCTGATAATGTATCCAAACTGAATTCTAATGGGTTTTTGACCAAGAGAACATCATCCTTTCAAATAAGGTCCTCTGTGTCCTCCAGCACAATTTTGAAGAACGCTAAAGGTGCATCTAAGTCTTTTGATGGTGGTTCTAGGTCGCTAGAAAGGAGTAAAATTCTTCTAAATGGAAAGCCTCCAAGTTCATCGTTTAACCAGTCTTCTGAAAGAACCAAAGACAAGGAGGAAAACAATAATTGGAAAGGAAGTTTGGATGATAAGCCTAATGACTTCCCATTAGTAGATGCAGAGGATACCGTTCCAGGAGTTTTGTATGATTTTCTGCAGAAAGAGGTCATAGTGTTGAGGAAAGCTGGTAATGAAAAAGATCAAATCCTAAAAGATAAAGACGATGCCATTGAGATGCTAGCAAAGAAAGTGGATACATTAACCAAAGCTATGGAAGTTGAGGCCAAGAAGATGCGAAGGGAAGTAGCTGTCATGGAGAAGGAGGTAGCTGCAATGCGCGTGGACAAAGAACAAGAGACAAAAGCCAAACGTTTCAGCAATGTGAAGAGCTCTATGAACAGTGCTCAGCAACAGCTTGTTTCTGGGAGAAACATGACACGAGGAGGATTAACACGAAGCACCCAGTGA 1869 0.4302 MAEFSGDVGMEATVVTPTPLTVSGSFKEGKNSSRRRQHSMRPSLDADEFMNLLHGSDPVKLELNRLENDVRDKDRELSEAQAEIKALKHTERLREKAVEELTEELSKVDGKLKLTENLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELMKQIEICQEENKILDKMLRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKFQEMNEERKTLDRELARAKVTANRVATVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLREKLATADRTAKYEAQLKEKYQLRLKVLQESLRETSNSINRGTSEGKCVSNGPSTSNGPSRRLSLGGADNVSKLNSNGFLTKRTSSFQIRSSVSSSTILKNAKGASKSFDGGSRSLERSKILLNGKPPSSSFNQSSERTKDKEENNNWKGSLDDKPNDFPLVDAEDTVPGVLYDFLQKEVIVLRKAGNEKDQILKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAVMEKEVAAMRVDKEQETKAKRFSNVKSSMNSAQQQLVSGRNMTRGGLTRSTQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04039 622 Coils Coil 555 582 - -
Vifa6g04039 622 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 42 601 IPR009768 GO:0007010|GO:0008017
Vifa6g04039 622 MobiDBLite consensus disorder prediction 1 47 - -
Vifa6g04039 622 Coils Coil 277 304 - -
Vifa6g04039 622 MobiDBLite consensus disorder prediction 29 43 - -
Vifa6g04039 622 Coils Coil 166 193 - -
Vifa6g04039 622 MobiDBLite consensus disorder prediction 379 412 - -
Vifa6g04039 622 Coils Coil 63 90 - -
Vifa6g04039 622 Coils Coil 326 353 - -
Vifa6g04039 622 MobiDBLite consensus disorder prediction 463 501 - -
Vifa6g04039 622 Coils Coil 98 132 - -
Vifa6g04039 622 Coils Coil 361 381 - -
Vifa6g04039 622 MobiDBLite consensus disorder prediction 592 622 - -
Vifa6g04039 622 MobiDBLite consensus disorder prediction 586 622 - -
Vifa6g04039 622 Pfam Microtubule-associated protein 70 47 603 IPR009768 GO:0007010|GO:0008017
Vifa6g04039 622 Coils Coil 218 266 - -
Vifa6g04039 622 MobiDBLite consensus disorder prediction 479 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04039 Vifa-Chr6 1332416996 1332422073 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04039 6 1332416996 1332422073 Vifa6g04039 6 1332416996 1332422073 ECH