Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04034 ATGTCGTGGGAAGACGAGGTTGTGATTCGCGATGTCACCAATGCCGGTCTTGTTGTCAGTGATCGAATTGGCCGTGAAGTTTCGTCGCAGCTTGACCTTGAAGAAGCTCTAGAAGCTTCCAGATATGCTAGCCACCCTTATTCTACTCACCCTAGAGAGTGGCCTCCTTTAGTTGAGGTAGCGAATACATGGGAGTTGCCTCCCGTTCTTATTGAAAGGTACAGAGCGGCCGGTGGGGAAGGGACTGCTTTTTGTGGAATATTTCCGGAAATACGTAGGGCATGGGCTTCTGTGGACAACACCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAGTGTCCCGAATATAGCAAAGAGGAACAAGCCATTTGTGCTGTCAGTCTTGCAAAATCAAAACCAGGAGTTTTCATCGAAGCTATCCAGTATCTTTTAATCTTAGCAACCCCGGTTGAGTTAGTTTTAGTTGGAGTGTGCTGCTCTGGAGGAGCAGATGGCTCAGATCCATTTGCAGAAGTTTCGTTACAGCCTTTGCCAGATTATACAATATCGTCTGACGGGGTTACGATGACATGTGTAGCATGTACTGACAAGGGCCGCATTTTCTTTGCTGGCCGCGATGGCCACATATATGAGCTTCTTTATTCAACTGGCTCAGGATGGCAAAAGCGCTGCAGAAAAGTATGCGTCACTGCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCAAATGTATTTAATTTTGGAGCTGTTGACCCTGTTGTTGAAATGGTTTTTGACAATGAGCGACAGATATTGTATGCTAGAACGGAAGAGATGAAAATTCAGGTTTATGTTCTTGGACCAATTGGTGATGGACCCTTAAAGAAAGTGGCTGAAGAAAGGAATCTTGTCAATCAGAAAGATGCACATCATGGAAGCAGACAATCAAGTGGATCAAGAGCATCAAGTCGATCACCGAAGCCATCTATTGTTAGCATTTCACCCTTATCTACACTTGAATCCAAATGGCTACATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTACCTATCCACCTCTCCAACTAGCGGAAGCTTGAACGGATTCAACACGAACCATCACAAACCTAGCTGTTTAAAGGTTGTCACAACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGCGGCCTCACGTTTGGAACTATGGCTCTTGCTGGTAGACCACAAAATGAGGATCTCTCACTGAAAGTTGAGGCAGCCTATTATTCTGCAGGAACTCTTATTCTTTCTGATGCCTCACCTCCTACTATGCCTTCACTCCTTGTTTTAAACAGGGATTCAAGCACACAGTCATCACCATCGGGTAATCTTGGGACAGGTACGAGGAACTCCCGGGCACTACGGGAATCCGTATCTTCTTTACCAGTTGAAGGTCGAATGCTTTCTGTGGTCGATGTTTTACCTCTACCAGATACTTCAGCTACTGTGCAGTCTCTATATTCAGAAATCGAGTTTGGTGTTTTTGAGAGCTCATTGGAATCGTGTGAAAGGGCGTCGGGCAAACTGTGGGCAAGGGGGGATCTCTCAACCCAACATATATTGCCAAGGAGGAGGATTGTCATCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTAGACATTTTAAGGCGGCTATTAGAGTCCAACTTTCCGAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCCGGTGAGGCAGCTGCAATGTGTTTAATGCTAGCTGCAAGGATAGTGCATTCTGAAAACTTTATCAGCAATGTTATTGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGACTTGTTGGCATGCCACAACTTGAAGGCAGTAATGCATTATCAAACACAAGAACTGGTGGTGGTGGATTTAGCATGGGTCAGGTTGTTCAGGAGGCCGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCATCTAGATTACTCTATCCTCTATGGGAACTACCTGTGATGGTTATAAAAAGAAGTGCAGGTGCTTCAGGCACTTCATTTGAAAATGGGGTAGTTGTATGCAGACTATCCATTGAGGCTATGCAAGTCCTTGAACACAAACTTCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGTTTAGGAGATGTTAGTGGTTCCATTCTGTATGGTAGTGGTTCTGCATTGGGTGCTGGTGACCGAAGTATGGTAAGAAACTTGTTTGGTGCATATTCCAGAAATATGGAATCCAATGGTGGTGGAGCCACAAATAAAAGGCAAAGGTTACCATATAGTCCTGCAGAATTAGCAGCCATGGAGGTGAGGGCAATGGAGTGCATTAGGCAGCTGCTCCTTAGGTCCGGTGAAGCTCTCTTTTTGCTTCAACTCCTCTCTCAGCATCACGTCACTCGCCTGGTTCAAGGATTTGATACTAACCTTCAACAAGCCTTAGTTCAGTTAACATTTCATCAACTTGTTTGTTCCGAGGACGGCGACCGTCTTGCTACAAGGCTTATATCTGCTCTAATGGAGTATTACACTGGTACAGATGGCAGGGGAACTGTAGATGACATTAGTAAGAGATTAAGAGAGGGTTGTCCAAGCTACTACAAGGAGTCCGATTACAAATTTTTCTTAGCCGTGGAAGCCCTGGAGAGAGCTGCTGTGACTATAGATGATGAGGAAAAGGAGACTCTCGCGCGTGAGGCATTGAATTCCTTAAGCAAAGTTCCAGAGTCTGCGGACTTACGCACTGTTTGCAAACGTTTTGAGGATTTAAGGTTTTACGAAGCTGTTGTGTCCTTACCTCTTCAAAAGGCACAGGCTATCGACCCCGCAGGTGATGCTTATAATGATGAAATTGATGCAACAGTCAGAGAACAAGCACTTGCTCAGCGTGAGCAGTGTTATGAGATAATTATCAGCGCTTTGCGCTCTCTTCAAGGTGACAGTGACACCTTGCGGAAGGAATTTAGCTCTCCCATTAGATCTGCTTCACAATCTGCACTTGATCCAGCCTCTCGGAAAAAGTATATAAGCCAAATTGTTCAGCTGGGTGTCCAATCTCCGGACAGAATTTTCCATGAGTATCTTTACCAGGCTATGATCGATTTAGGCCTTGAGAATGAACTGTTAGAGTATGGAGGCCCTGACCTGTTGTCATTTTTGCAAAGTGCTGGTCGTAAACCCATACACGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAATGGGCCAATCAGGAGCACCTATGTCCTCTAATCAAGTCAAGTACTATGAACTTTTGGCACGTTATTATGTCTTGAAGCGACAACATATGCTTGCTGCTCATGCATTGCTAAGACTAGCTGGAAGACCTTCAACTGAAGGAGTTCCTGCTCTTGAACAAAGGTGTCAATACCTAAGCAATGCAGTTCTACAGGCAAAGAATGCAACTAATAGTGATATGTTGATTAGTTCTACTCGAAGTTCCAGCGACACTGGATTACTAGATATGATTGAAGGGAAGCTTGCTGTTCTTCGGTTTCAGATAAAAATAAAAGAGGAACTAGAGGCTATGGCTTCCAGTTCAGAGGTCTTACAGAGCACATCCAATTCTGTTGAAAATGGTATTGTCCCTGAGGCCAGTTCAACTATCGATGGCAATGTAACACGGGAGAAAGCCAAGGAGTTATCATCAGATTTGAAGAGCATAACTCAGTTATATAATGAATACGCTGTTCCCTTTAAGCTCTGGGAGGCCTGCCTGGAGATGCTGTACTTTGCCAATTATTCGGGTGATAGTGACAGCAGTATTGTCAGAGAGACATGGGCTAGACTTATAGATCAAGCTATTTCAAGAGGCGGCATTGCTGAAGCTTGCTCAGTGCTTAAGAGAGTTGGGCCTCGACTATATCCCGGTGATGGAACTGTTTTGCAGCTTGACATTATTTGTCTTCACCTGGAGAAGGCTGGACTGGAGAGATTAAATTCAGGAGTCGAAACCGTTGGAGATGAAGATGTTGCGAGAGCGCTTGTTTCTGCTTGTAAGGGTGCAGCAGAACCTGTCTTGAACGCATATGATCAATTGTTATCAAATGGGGCAATTTTGCCATCCCCAAATCTTAGATTACGGATGCTGAGATCAGTTCTAGTGGTACTTCGAGAGTGGGCTATGTCTATTTATTCACACAGGATGGGTACAGGTGCCACTGGTTCTTCCATAATATTAGGTGGTGGATTCTCATTGGAACGAACAGTTGCTAGCCAAGGAATTCGGGACAAGATCACAAGTGTGGCAAACAGGTATATGACTGAAGTACGGAGGTTAGCCCTTCCGCAGAGCCAAACAGAAGTGGTTTACCGCGGCTTTAAAGAACTCGAAGAGTCACTCATAAGTCCTAATTCTTACGGTCGATTTTGA 4452 0.4481 MSWEDEVVIRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYRAAGGEGTAFCGIFPEIRRAWASVDNTLFLWRFDKWDGQCPEYSKEEQAICAVSLAKSKPGVFIEAIQYLLILATPVELVLVGVCCSGGADGSDPFAEVSLQPLPDYTISSDGVTMTCVACTDKGRIFFAGRDGHIYELLYSTGSGWQKRCRKVCVTAGLGSVISRWVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKIQVYVLGPIGDGPLKKVAEERNLVNQKDAHHGSRQSSGSRASSRSPKPSIVSISPLSTLESKWLHLVAVLSDGRRMYLSTSPTSGSLNGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGTRNSRALRESVSSLPVEGRMLSVVDVLPLPDTSATVQSLYSEIEFGVFESSLESCERASGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNFPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENFISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTGGGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLYPLWELPVMVIKRSAGASGTSFENGVVVCRLSIEAMQVLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGSGSALGAGDRSMVRNLFGAYSRNMESNGGGATNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLVQGFDTNLQQALVQLTFHQLVCSEDGDRLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKETLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVSLPLQKAQAIDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLQGDSDTLRKEFSSPIRSASQSALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLSFLQSAGRKPIHEVRAVTATTSPMGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAGRPSTEGVPALEQRCQYLSNAVLQAKNATNSDMLISSTRSSSDTGLLDMIEGKLAVLRFQIKIKEELEAMASSSEVLQSTSNSVENGIVPEASSTIDGNVTREKAKELSSDLKSITQLYNEYAVPFKLWEACLEMLYFANYSGDSDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRLYPGDGTVLQLDIICLHLEKAGLERLNSGVETVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGATGSSIILGGGFSLERTVASQGIRDKITSVANRYMTEVRRLALPQSQTEVVYRGFKELEESLISPNSYGRF 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04034 1483 FunFam Nuclear pore complex protein NUP155 894 1055 - -
Vifa6g04034 1483 Pfam Nup133 N terminal like 54 543 IPR014908 -
Vifa6g04034 1483 FunFam Nuclear pore complex protein NUP155 1058 1155 - -
Vifa6g04034 1483 Gene3D - 1181 1459 IPR042538 -
Vifa6g04034 1483 Gene3D Nucleoporin, helical domain, central subdomain 1058 1155 IPR042537 -
Vifa6g04034 1483 Gene3D - 894 1055 IPR042533 -
Vifa6g04034 1483 MobiDBLite consensus disorder prediction 434 464 - -
Vifa6g04034 1483 MobiDBLite consensus disorder prediction 299 324 - -
Vifa6g04034 1483 FunFam Nuclear pore complex protein NUP155 1181 1414 - -
Vifa6g04034 1483 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 12 1476 IPR004870 GO:0005643|GO:0006913|GO:0017056
Vifa6g04034 1483 MobiDBLite consensus disorder prediction 435 464 - -
Vifa6g04034 1483 MobiDBLite consensus disorder prediction 304 324 - -
Vifa6g04034 1483 Gene3D - 531 883 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04034 6 1330795758 1330805158 Vifa6g04034 6 1330795758 1330805158 ECH