LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa6g04033	ATGGCCGACGCTTTATCGGCTGTTCCGCCTGCCGTTCTTCGCAACCTTGCTGATAAGCTCTATGAAAAACGCAAAAATGCTGCTCTTGAGATTGAGAATATAGTCAAGCATTTAGCTAGTAATGGAGATCATGATAAAATTGTGGCTGTCATCAATTTGTTGACTACAGAATTTACTTATTCACCTCAATCTAATCATCGAAAGGGGGGATTGATTGGATTGGCTGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCTCCAGTGCTGAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGAGTTTATTGTATTCTTCAACCAGATCTTTGATGCATTATGCAAGCTTTCTGCAGATTCTGATGCAAATGTACAAAGTGCTGCTCATCTCTTAGATCGCCTTGTGAAGGATATTGTGACTGAAAGTGATCAATTCAGTATTGAAGAATTTATACCACTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCGGATATTGATATGTTGGGGTTTCTTCCTGATTTTCTTGATGGATTGTTTAACATGTTAAGTGATTCGAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAAATTAAGAACTCACCATCTGTAGATTATGGTCGTATGGCTGAAATACTGGTAGAGAGGGCAAGTTCTCCAGACGAGTTTACGAGGCTAACAGCTCTCACTTGGATAAACGAGTTTGTCAAACTTAGTGGAGATCAGCTTGTTCCATATTATGCAGACATTCTTGGAGCCATTTTGCCTTGCATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCCCGTGAAACCAATGAAGAGCTACGTACCATGAAGGCTGATCCTGCTGAAGGATTTGATGTAGGAGAAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTAAATAACTATCGCCCTGAGGTTTTGCAATATTTGAATGACATATTCGACACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTGGTTCTTGATGTTCATGCATGCATTGCAAAAGATCCTCAGCACTTTCGTCAGCTTGTTGTTTTCCTGATGCACAATTTCCGGATAGACAATTCACTTTTGGAGAAGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGGATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTTGAAGGAGAATCTGATTTGGGTTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAACTATCTGAGCTTAGAGTTCTTTTGAAGCAAACACTGGTAAATCCTGCCGGGAGGGATTTATATGTTTCCTTGTATGCCTCATGGTGTCATTCTCCAACGGCAATCATAAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGTGAGTACTGTGATTCAATCTCTGTCAGAGGAGGATATTAATGTCAAATTCTTAGTACAGCTGGATAAATTGATCCGTTTGCTGGAAACTCCGGTCTTTGCTTATCTTCGACTGCAGCTTTTGGAACCTGGAAAATATACATGGCTATTTAAAGCACTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGCGCTGCGTTCAAGATACTGAAAACTCGCATAAAAGCTGTGCCAGCATATTCTTTCAATGAGGATGGTGACGTAGCCGTGGACAATGGGAACTCGCACAATGGAATCAATTTTACTACAAGGATAAAACAGTTTCAGGAAATGCAGCAACAGCATCGCGAGCATTTCAGAACACAAGCACAGATACGCAAAAAGATCGCACCTGTACCAAAGGAGGAGGAGGAGGTTCCAAGACAACAAGAAGAAACAAAGAGACCTCAATTGAGTGAGCTTAATGTTGTACCAAGATCATCCAGGAGATCTAGCGAGCTAGCTAGATAA	2103	0.4132	MADALSAVPPAVLRNLADKLYEKRKNAALEIENIVKHLASNGDHDKIVAVINLLTTEFTYSPQSNHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVERASSPDEFTRLTALTWINEFVKLSGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRTMKADPAEGFDVGEILSIARRQLSSEWEATRIEALHWISTLLNNYRPEVLQYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRIDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESDLGFASIMVQALNLILLTSSELSELRVLLKQTLVNPAGRDLYVSLYASWCHSPTAIISLCFLAQTYQHVSTVIQSLSEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGKYTWLFKALYGLLMLLPQQSAAFKILKTRIKAVPAYSFNEDGDVAVDNGNSHNGINFTTRIKQFQEMQQQHREHFRTQAQIRKKIAPVPKEEEEVPRQQEETKRPQLSELNVVPRSSRRSSELAR	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa6g04033	700	Pfam	Vacuolar 14 Fab1-binding region	65	161	-	-
	Vifa6g04033	700	PANTHER	TAX1 BINDING PROTEIN-RELATED	8	658	IPR026825	GO:0006661\|GO:0070772
	Vifa6g04033	700	Pfam	Vacuolar protein 14 C-terminal Fig4p binding	429	608	IPR021841	-
	Vifa6g04033	700	Gene3D	-	1	246	IPR011989	-
	Vifa6g04033	700	FunFam	ARM repeat superfamily protein	6	125	-	-
	Vifa6g04033	700	FunFam	protein VAC14 homolog isoform X1	249	410	-	-
	Vifa6g04033	700	MobiDBLite	consensus disorder prediction	656	679	-	-
	Vifa6g04033	700	MobiDBLite	consensus disorder prediction	656	700	-	-
	Vifa6g04033	700	FunFam	protein VAC14 homolog	126	248	-	-
	Vifa6g04033	700	SUPERFAMILY	ARM repeat	3	549	IPR016024	-
	Vifa6g04033	700	Gene3D	-	247	410	IPR011989	-
	Vifa6g04033	700	ProSiteProfiles	HEAT repeat profile.	92	127	IPR021133	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa6g04033	Vifa-Chr6	1330119577	1330126055	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa6g04033	6	1330119577	1330126055	Vifa6g04033	6	1330119577	1330126055	ECH