Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04015 ATGACACTCTCTCTTCTCTTCCTTGTCACAATCTTAACCATTATGATAACCCCTTCAATTTCCGACACAAACTCTTTCATCTTCGGTGGTTGTTCTCGTCTCAAATTCTCTCCTGGTTCCAACTACGAAACAAGCGTAAACTCCATTCTCTCTTCCTTAGTCAACTCAGCAACGTTCACAACCTACAGTAATTTCACTGTCCCGGGAACCACCGCGTCGGAAACCGTCTACGGAATTTTCCAGTGCCGCGGTGATATTAACAATGACCAGTGTTCAAGCTGTGTCCAGCGTGCGGTGAGTCAACTCGGAACACTCTGTTTCGAAACCTACGGTGGCGCGTTGCAGCTCGAAGGTTGTTTCGTGAAGTACGATAATGTTAAATTTATTGGGGTAGAGGACAAAACGGAAGTGGTCAAGAAATGTGGACCGTCGATTGGGTTGACTTCTGATGCAAGAGACGATGTGCTGGCTTATTTAGAGTCGTCCGATGGGGTTTACAAAACTTTTAGAACGACTTCTTCTGGGGATTTTTCGGGTGCGGCGCAGTGCACGGGGGATTTGAGTTCCAGCGAGTGTCAGGATTGCGTTTCGGATGCGATCCAACGGTTGAGAAGTGAGTGTGGGGGTTCTACTTGGGGTGATATCTATTTGGCTAAATGCTACGCGCGGTATTCGGAAGGTGGACTTCACTCGCGTCGTGGTAACGATGATGAAAATCACAATGATGATGAGATTGAGAAGACACTAGCCATACTAATTGGACTTATTGCTGCTGTTGCATTGATAATTGTTTTTCTTTCCTTCTTGTCAAAACTTTGTGAAAAGCAGAGAGGTAGCAAATGA 843 0.4579 MTLSLLFLVTILTIMITPSISDTNSFIFGGCSRLKFSPGSNYETSVNSILSSLVNSATFTTYSNFTVPGTTASETVYGIFQCRGDINNDQCSSCVQRAVSQLGTLCFETYGGALQLEGCFVKYDNVKFIGVEDKTEVVKKCGPSIGLTSDARDDVLAYLESSDGVYKTFRTTSSGDFSGAAQCTGDLSSSECQDCVSDAIQRLRSECGGSTWGDIYLAKCYARYSEGGLHSRRGNDDENHNDDEIEKTLAILIGLIAAVALIIVFLSFLSKLCEKQRGSK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04015 280 ProSiteProfiles Gnk2-homologous domain profile. 130 229 IPR002902 -
Vifa6g04015 280 FunFam cysteine-rich repeat secretory protein 3 23 128 - -
Vifa6g04015 280 Pfam Salt stress response/antifungal 154 225 IPR002902 -
Vifa6g04015 280 Pfam Salt stress response/antifungal 34 125 IPR002902 -
Vifa6g04015 280 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 273 - -
Vifa6g04015 280 ProSiteProfiles Gnk2-homologous domain profile. 24 128 IPR002902 -
Vifa6g04015 280 Gene3D - 147 227 IPR038408 -
Vifa6g04015 280 Gene3D - 23 128 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04015 Vifa-Chr6 1324092775 1324093784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g04015 8 224 Receptor kinase-like Gene Family AT4G05200 24.167 1.72e-14 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04015 6 1324092775 1324093784 Vifa6g04015 6 1324092775 1324093784 ECH