Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01897 ATGAAAGGGGCAAAACCTAAAGACCGTTTGCACCCACCAATTGTCATGGATGATGATGTGTTGAATATGCCCAATTGGGGTTACTATGAGCCCTTCAAGGGTGGGAATCTGGGTCTGAACCTGATGCCTGATATTAATGATCGTGAAACGAAGCCGTTTTTTCCTGGTCGTGATCCGGCTATGTTAGTAGGTGCGAATGGAGGTTTTCATCCTCGTGATGGTGCTGTTGTTGAGCCGCCTGCTCAGTTGAACTATGTTAGGGATAATTGGATGAATCCGAGACATAGGTTTTATAATATGCAGCTTGTGAATTCGAGTTATGCTGCTGTTCTTCCTGAAACATCGCAGGCACTCTCCTTGCCGTTTGTCCAGCCACCGGCGGATGCATCGAGGAATGAGAATGGGGATGGGATTGAAGAGTTAGCTGTTAAGAAGGAAGGAGGCAAGTCGAAGAAAAGGAAATCGAAGGGTGCTCTTACCGTTCCGAAAGCTAAGAAACCCAAGAAGGCAAAGGAGAATGGCAATAATTCAGCTCAAGGTGTGAAACCACCGAAGAAGACTGTGGCGCTTGAAATAAACGGAATTGAAATGGACATTTCTGGTCTACCTGTTCCTGTTTGTTCATGCACTGGGAGTCCTCAGCAGAGTTATCGGTGGGGCTGTGGAGGTTGGCAATCAGCTTGCTGTACCACAAATGTGTCAATCCATCCTTTGCCGATGAGCGTCAAAAGGCGCGGCGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGAGCTTTCAAAAAGGTTTTAGAAAAGCTTGCAGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGATAG 888 0.4651 MKGAKPKDRLHPPIVMDDDVLNMPNWGYYEPFKGGNLGLNLMPDINDRETKPFFPGRDPAMLVGANGGFHPRDGAVVEPPAQLNYVRDNWMNPRHRFYNMQLVNSSYAAVLPETSQALSLPFVQPPADASRNENGDGIEELAVKKEGGKSKKRKSKGALTVPKAKKPKKAKENGNNSAQGVKPPKKTVALEINGIEMDISGLPVPVCSCTGSPQQSYRWGCGGWQSACCTTNVSIHPLPMSVKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01897 295 PANTHER - 16 295 IPR010409 -
Vifa6g01897 295 SMART GAGA_bind_2 16 295 IPR010409 -
Vifa6g01897 295 MobiDBLite consensus disorder prediction 142 185 - -
Vifa6g01897 295 Pfam GAGA binding protein-like family 16 295 IPR010409 -
Vifa6g01897 295 MobiDBLite consensus disorder prediction 148 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01897 Vifa-Chr6 707614896 707618116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01897 16 295 BBR or BPC Transcription factor family AT2G01930 56.522 2.00e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vifa6g01897 GAGA_bind 2.8e-96 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01897 6 707614896 707618116 Vifa6g01897 6 707614896 707618116 ECH