Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03925 ATGGCGGAAGCTCTCTCGGTGATGCCGGCGGCCGTGCTCCGTAACCTTGCCGATAAACTCTATGAGAAACGCAAAAATGCTGCTCTTGAGGTTGAGGGGATTGTGAAGCAGCTTGCTTCTGCTGGTGATCATGATAAGATTACCTCTGTGATTACTTTGTTGACTACGGAATTTACTTATTCGCCCCAAGCAAATCATCGCAAGGGAGGCTTGATAAGCTTAGCTGCTGCTACGGTTGGGTTGACTAATGAAGCTGCTCAGCATCTTGAGCAAATTGTGCCTCCTGTGTTAAATTCTTTCTCGGATCAAGATAGCAGAGTTCGTTATTATGCCTGTGAAGCACTATATAACATTGCCAAGGTTGTGAGAGGAGATTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGATTCAGATGCCAATGTACAAAGTGCTGCACATCTCTTGGATCGACTCGTAAAGGATATTGTGACCGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCATTATTGAGGGAGCGCATGAATGTACTTAATCCATATGTCCGCCAATTTTTGGTAGGATGGATTACTGTATTGGACAGCGTACCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCGGAGTTTCTTCAAGAGATAAAGAACTCCCCATCTGTAGATTATGGCCGAATGGCTGAAATACTGGTACAAAGAGCTAGTTCTCCGGATGAATTTACGAGATTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCCGATAAAGAAGAGAAAATTAGAGTCGTTGCCCGGGAAACCAATGAAGAGCTACGAGCAATCAATGCTAATCCAGCTGAAGCATTCGATGTAGGAGCAATCCTCTCCATTGCAAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAATCCTCCTAAACAGACATCGTATTGAGGTTTTGATATACCTGAATGACATATTTGACACCCTACTAAAAGCACTTTCAGATCCATCTGATGAGGTTGTTCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAAAGACCCTCAGCACTTCCGACAACTTGTCGTTTTCCTTGTGCACAGTTTCAGGCTAGATCATTCTCTTTTGGAGAAGCGCGGTGCTTTGATAATTCGCCGCCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATATTAGAAGGAGAATCAGATTTGGATTTTGCATCAATTATGATTCAGGCATTGAATTTGATCTTACTTACATCATCAGAATTGTCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAAGACTTGTATGTTTCTTTGTATGCCTCTTGGCGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTCTTAGCTCAGACTTACCGACATGCCAGTACTGTGATTCAGTCTCTGATAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAACTGGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTACCTTAGATTGCAGCTTCTCGATCCTGGAAGATATTTATGGCTATTCAAATCGTTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCAGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCGTCATATTCTTTCAATCGTGAGCAATTGAATAGAATGCCTTCTGGGGATTACTACGAATTTGTTCCTCAGATGCCAGATGAAAAAAAAAAAGATGGTCATGTAACTGAAGACGGTGGGAGCTCATATAGTGGATTAAACTTTACTGAAAGGTTAAATGAGTTTCAGGAAATGCAGAAGAAACATCGGGTTCACAACAAATCACAAAGAACATTACGCAGTTTATCGACTTCATTACCAAAGGTGGCACAGAAACAAGAAGAGCCAGAAGAGCCACAGAGACAACAGTCTATTGATCTTAATGTTCCTCCTTCAAGATCAAGGAGAAATTCAGGGCAAATACAACGATAA 2175 0.4083 MAEALSVMPAAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDKITSVITLLTTEFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRASSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAINANPAEAFDVGAILSIARRQLSSEWEATRIEALHWISILLNRHRIEVLIYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLVHSFRLDHSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMIQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWRHSPMAIISLCFLAQTYRHASTVIQSLIEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLDPGRYLWLFKSLYGLLMLLPQQSAAFKILKTRLKAVPSYSFNREQLNRMPSGDYYEFVPQMPDEKKKDGHVTEDGGSSYSGLNFTERLNEFQEMQKKHRVHNKSQRTLRSLSTSLPKVAQKQEEPEEPQRQQSIDLNVPPSRSRRNSGQIQR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03925 724 Gene3D - 2 247 IPR011989 -
Vifa3g03925 724 FunFam protein VAC14 homolog 126 248 - -
Vifa3g03925 724 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Vifa3g03925 724 MobiDBLite consensus disorder prediction 666 724 - -
Vifa3g03925 724 MobiDBLite consensus disorder prediction 635 654 - -
Vifa3g03925 724 SUPERFAMILY ARM repeat 11 542 IPR016024 -
Vifa3g03925 724 FunFam protein VAC14 homolog isoform X1 249 410 - -
Vifa3g03925 724 Gene3D - 248 410 IPR011989 -
Vifa3g03925 724 MobiDBLite consensus disorder prediction 703 724 - -
Vifa3g03925 724 PANTHER TAX1 BINDING PROTEIN-RELATED 7 681 IPR026825 GO:0006661|GO:0070772
Vifa3g03925 724 FunFam ARM repeat superfamily protein 7 125 - -
Vifa3g03925 724 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Vifa3g03925 724 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03925 Vifa-Chr3 1159918925 1159929432 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03925 3 1159918925 1159929432 Vifa3g03925 3 1159918925 1159929432 ECH