Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03916 ATGGAGGAAATTTTTGGCGACGGAGGAGGAGTTGCGACGCCGGTGCCGCTTTCGGTTTCGGGATCTTTCCGAGAAGGGAGAGGCTCGTCGAGGAGACGCGGCTCGGCTAGACAGCCGAGCATGGAGGCGGATGAGTTCATGAATTTGTTGCACGGTTCGGATCCGGTGAAGGTGGAACTTAATCGGCTTGAGAATGAAGTTCGAGATAAGGATAGAGAGTTATCAGAAGCACAAGCTGAGATTAAAGCGTTGAGGCATTCTGAACGATTAAGAGAAAAGGCAGTTGAAGAGCTGTCTGAAGAGCTGTCAAAGGTTGATGGGAAGCTAAAGTTATCAGAGTCTCTATTAGAAAGCAGAAATCTTGAAATAAAGAAAATCAATGATGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCAGAAGCTACTCTTCGAAGGGTTCATGCTGCTCAAAAGGATGATGACATGCCTCCGATAGAAGCAATTCTTGCCCCTTTGGAGGCTGAACTAAAACTTGCTCGGCAAGAGATTGCTAAACTACAAGATGACAACAGAGCTTTAGACCGTCTTACCAAATCCAAAGAAGCTGCACTACTTGAAGCTGAAAGGACTGTTCAGTTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTCCAAAACAAAAATCAAGAGCTGATGAAGCAGATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGACAGAATGCATAGACAAAAGGTGGCAGAGGTTGAAAAGCTCACCCAAACTGTGAGGGAACTAGAAGAGTCGGTCCTTGCAGGTGGTGCAGCAGCAAATGCAGTGAGAGATTATCAACGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTTAATAGGGAATTGGGCCGTGCCAAGGTAACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGTCATGCCTGTCAAACAATGGCTTGAAGAACGACGATTCTTGCAGGGGGAAATGCAGCAACTCCGTGATAAGCTTGCTATAGCTGAGCGCACTTCAAAATCTGAAGCACAGTTGAAAGAAAAATATCAATTACGGCTTAAAGTGCTAGAGGAGAGTTTGAGGGGCAATTCTAGCAGCAGTAGTCGCAGCACTATAGAGGGAAGAAGTATGAACAATGGTTATTCTCGTCGCCAATCACTGGGTGGAGCTGATAATATCTCAAAACTAACCTCTAACGGGTTCTTGCCTAAGAGAGCACCATCCCCTCAACTCAGGAGTAAAACGTTACTGAGTGGAGCACCTCAAACTCAAAGTTACTCATTCAACCAATCTCTTGAAGAAACCAAAGAGAGAGACGCTGATGATAATTGGAAAGGAAGTTCAGGTGATAAGCCAAATGACTTCCCACCAGGGGATACAGATGATAGTATTCCAAGTGTTTTATATGACCTCTTGCAGAAAGAAGTTATTGCCTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGCCTAAAAGACAAAGATGATGCCATTGAGATGTTAGCAAAGAAAGTAGATACATTAACCAAAGCCATGGAAGTTGAAGCAAAGAAGATGAGAAGAGAAGTAGCTGCCATGGAAAAGGAGGTAGCTGCTATGCGTGTCGAGAAAGTACAAGAGAACAGAGCAAAGCGGTTCAGCAATTTAAAGGGTCCTGTAAACAGTGCTCAAAATCAGCTAATTTCTGGAAGAAATGTGACACGGGGAGGATTAACACGCAGCACTCAATAA 1764 0.4382 MEEIFGDGGGVATPVPLSVSGSFREGRGSSRRRGSARQPSMEADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELSEELSKVDGKLKLSESLLESRNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKSKEAALLEAERTVQFALAKASMVDDLQNKNQELMKQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEESVLAGGAAANAVRDYQRKVQEMNEERKTLNRELGRAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIAERTSKSEAQLKEKYQLRLKVLEESLRGNSSSSSRSTIEGRSMNNGYSRRQSLGGADNISKLTSNGFLPKRAPSPQLRSKTLLSGAPQTQSYSFNQSLEETKERDADDNWKGSSGDKPNDFPPGDTDDSIPSVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVEKVQENRAKRFSNLKGPVNSAQNQLISGRNVTRGGLTRSTQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03916 587 MobiDBLite consensus disorder prediction 559 587 - -
Vifa3g03916 587 MobiDBLite consensus disorder prediction 372 416 - -
Vifa3g03916 587 Coils Coil 215 263 - -
Vifa3g03916 587 Coils Coil 60 87 - -
Vifa3g03916 587 MobiDBLite consensus disorder prediction 444 460 - -
Vifa3g03916 587 MobiDBLite consensus disorder prediction 372 477 - -
Vifa3g03916 587 MobiDBLite consensus disorder prediction 557 587 - -
Vifa3g03916 587 Coils Coil 274 301 - -
Vifa3g03916 587 MobiDBLite consensus disorder prediction 1 41 - -
Vifa3g03916 587 Pfam Microtubule-associated protein 70 435 568 IPR009768 GO:0007010|GO:0008017
Vifa3g03916 587 Pfam Microtubule-associated protein 70 44 426 IPR009768 GO:0007010|GO:0008017
Vifa3g03916 587 Coils Coil 163 190 - -
Vifa3g03916 587 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 39 566 IPR009768 GO:0007010|GO:0008017
Vifa3g03916 587 Coils Coil 520 547 - -
Vifa3g03916 587 Coils Coil 323 350 - -
Vifa3g03916 587 MobiDBLite consensus disorder prediction 423 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03916 Vifa-Chr3 1158221754 1158228752 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03916 3 1158221754 1158228752 Vifa3g03916 3 1158221754 1158228752 ECH