Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03915 ATGGCGACTATGACGAGCTTGATTGGTCTCATCAACAAGATCCAGCGTGCATGCACTGTCTTAGGTGATCACGGCGGTGGTGGCTTGTCACTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTTGGAGGACAGAGTTCAGGAAAATCGTCGGTGTTAGAGAGCGTCGTTGGAAGGGATTTTCTACCTCGTGGATCCGGTATTGTCACACGAAGGCCGCTGGTGTTACAACTTCACAAGACGGAGGATGGACAACAGGATTATGCCGAGTTTCTTCATGCGCCTAGAAAGAGATTCACTGACTTCGTTGCTGTAAGGCAGGAAATTGCAGACGAAACAGATCGTATAACTGGGAAGTCGAAGCAAATTTCAAACATTCCAATTCAATTAAGCATACATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCTGGATTGACAAAAGTTGCCGTAGAGGGACAATCCGAATCTATTGTTCAAGATATTGAAAACATGGTCCGATCCTATGTTGAGAAGCCCAACTGCATTATATTGGCCATCTCTCCTGCAAACCAAGATATTGCCACTTCAGATGCAATAAAAATTGCAAAAGAAGTTGATCCTTCGGGTGAAAGAACATTTGGAGTGGTGACAAAACTTGATCTTATGGATAAAGGAACAAATGCCGTTGATGTTCTGGAAGGAAGACATTACAGGTTGCAGCATCCATGGGTTGGAATTGTTAACCGTTCACAAGCAGATATTAATAAAAACGTTGACATGATTCTTGCTCGCAAGAAGGAGCGTGAATATTTTGAGACGAGCCCTGAATATGGACATTTGGCACATAAAATGGGTGCAGAATACCTTGCAAGACTTCTATCTGAGCATCTGGAGATTGTCATTAGGCAGCGGATTCCTAGTATCATTGCCTTAATAAATAAAACCATTGACGAGCTTAATGCAGAGTTGGACCGTATTGGCAGGCCTATAGCTGTGGATTCCGGGGCCCAACTATACACTATTTTAGAGATGTGTCGAGCATTCGACAAAGTATTTAAGGAACACATCAATGGAGGACGTCCAGGCGGGGACAAAATTTATGGGGTTTTTGACAACCAATTACCGGCTGCTTTGAAAAAGCTCCCCTTTGATCGTCATCTTTCCCTAAAAAATGTACAGCGAGTCGTTACTGAAGCCGATGGTTATCAGCCCCATCTGATTGCTCCAGAACAAGGGTACAGAAGACTTATTGAAGGATGTTTAGGCTACTTCAAAGGCCCAGCCGATGCCTCTGTGGATGCTGTCCACCTTGTTCTAAAAGAGCTTGTACGGAAGGCAATTGCAGCAACTGAGGAATTGAAGAGGTTTCCAACACTTAAAAGTGAAATAGCCACAGCTGCAAATGATTCTTTGGATAGATTTCGAGAAGAAAGTAGGAAGACAGTGACCCGACTAGTTGATATGGAGTCTAGCTATCTAACAGTAGAATTTTTTCGGAAGATTAATCTTGAATCAGAAACAACCCCAGGTCGGAATACCCCTAATAATCCTAATCCTAATCTGGACAATTACTCGGATAATCACCTCAGGAAAATCGGATCAAACGTTAATGCCTATATCAACATGATATGTGACACACTTAAAAATTCTATACCAAAAGCTGTGGTTTACTGTCAAGTTAGAGAAGCAAAGAGATCATTGCTTAACCGCTTTTATGTTCAAGTTGGAAAAAAAGAGAAGGAGCAACTCGGGACCATGTTGGATGAAGATCCCGCACTTATGGAAAAGAGAACACAGTTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGACATTGACTCAGTGGCTTGGAAATAA 1848 0.428 MATMTSLIGLINKIQRACTVLGDHGGGGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQDYAEFLHAPRKRFTDFVAVRQEIADETDRITGKSKQISNIPIQLSIHSPNVVNLTLIDLPGLTKVAVEGQSESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAKEVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRHYRLQHPWVGIVNRSQADINKNVDMILARKKEREYFETSPEYGHLAHKMGAEYLARLLSEHLEIVIRQRIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHINGGRPGGDKIYGVFDNQLPAALKKLPFDRHLSLKNVQRVVTEADGYQPHLIAPEQGYRRLIEGCLGYFKGPADASVDAVHLVLKELVRKAIAATEELKRFPTLKSEIATAANDSLDRFREESRKTVTRLVDMESSYLTVEFFRKINLESETTPGRNTPNNPNPNLDNYSDNHLRKIGSNVNAYINMICDTLKNSIPKAVVYCQVREAKRSLLNRFYVQVGKKEKEQLGTMLDEDPALMEKRTQLAKRLELYKQARDDIDSVAWK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03915 615 ProSiteProfiles GED domain profile. 524 615 IPR020850 -
Vifa3g03915 615 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Vifa3g03915 615 Gene3D - 4 310 IPR027417 -
Vifa3g03915 615 SMART GED_2 519 612 IPR003130 GO:0003924|GO:0005525
Vifa3g03915 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 309 IPR027417 -
Vifa3g03915 615 PRINTS Dynamin signature 60 77 IPR022812 -
Vifa3g03915 615 PRINTS Dynamin signature 202 218 IPR022812 -
Vifa3g03915 615 PRINTS Dynamin signature 183 201 IPR022812 -
Vifa3g03915 615 PRINTS Dynamin signature 35 53 IPR022812 -
Vifa3g03915 615 PRINTS Dynamin signature 225 244 IPR022812 -
Vifa3g03915 615 PRINTS Dynamin signature 133 150 IPR022812 -
Vifa3g03915 615 Pfam Dynamin GTPase effector domain 520 612 IPR003130 GO:0003924|GO:0005525
Vifa3g03915 615 FunFam dynamin-related protein 1E 4 310 - -
Vifa3g03915 615 PANTHER DYNAMIN 6 612 IPR022812 -
Vifa3g03915 615 Gene3D Dynamin, middle domain 327 578 - -
Vifa3g03915 615 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Vifa3g03915 615 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Vifa3g03915 615 Pfam Dynamin central region 222 489 IPR000375 -
Vifa3g03915 615 Pfam Dynamin family 38 213 IPR045063 -
Vifa3g03915 615 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Vifa3g03915 615 FunFam Dynamin-related protein 1C 332 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03915 Vifa-Chr3 1156723354 1156729328 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03915 3 1156723354 1156729328 Vifa3g03915 3 1156723354 1156729328 ECH