Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03911 ATGGCTGAAGAAACAGACTCAACACTCACCCAATTCAAAAACACTGTCACAAAACTTGGTTCTTCAACACAGGGTTATGGGGACGCTACACTGATGAGGTTTTTGATTGCTCGGTCAATGGATTCTGATAAAGCAGCTAAGATGTTTGTTCAATGGCGTAAGTGGAGAGAGACTATGGTTCCTAATGGGTTTATTTCAGATTCTGAAGTTCCTGATGAGTTGGAAACTAGAAAGATCTTCTTGCAGGGTTTGTCTCAAGATAAATATCCTCTCATGATTGTTCAAGCATGTAGACACTTCCCTTCCAAAGATCAGAATCAATTCAAGAAATTTATTGTACATTTACTGGACAAGACCATTGCGAGTGCTTTTAAAGGAAGGGAGGTAGGAAATGAAAAGTTGATTGGAATTCTTGATTTGCAAAATATTTCTTATAAGAATGTTGATGCGCGTGGTTTAATTACTGGATTTCAATTCTTACAGAGTTATTACCCTGAACGTTTAGCAAAGTGCTATATGTTACATATGCCATGGTTTTTTGTGAGTGTTTGGAGATTAGTTTCTGGCTTCCTAGACAAGGCAACACAAGAAAAGATTGTAATTATAAGCAATGAAGATGAGAGAAAGGAGTTTATAAAGGAAGTTGGTGAAGAGATTCTCCCAGAAGAGTATGGTGGAAAAGCAAAGCTCGTAGCCATCCAAGATTTTGAAGTGATACCACAGGAAAATGGTAGAACAAATTGA 744 0.375 MAEETDSTLTQFKNTVTKLGSSTQGYGDATLMRFLIARSMDSDKAAKMFVQWRKWRETMVPNGFISDSEVPDELETRKIFLQGLSQDKYPLMIVQACRHFPSKDQNQFKKFIVHLLDKTIASAFKGREVGNEKLIGILDLQNISYKNVDARGLITGFQFLQSYYPERLAKCYMLHMPWFFVSVWRLVSGFLDKATQEKIVIISNEDERKEFIKEVGEEILPEEYGGKAKLVAIQDFEVIPQENGRTN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03911 247 Pfam CRAL/TRIO domain 75 226 IPR001251 -
Vifa3g03911 247 SUPERFAMILY CRAL/TRIO N-terminal domain 4 65 IPR036273 -
Vifa3g03911 247 SMART sec14_4 73 229 IPR001251 -
Vifa3g03911 247 CDD SEC14 80 227 IPR001251 -
Vifa3g03911 247 Gene3D - 1 244 IPR036865 -
Vifa3g03911 247 PANTHER OS03G0850700 PROTEIN 3 235 - -
Vifa3g03911 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Vifa3g03911 247 SUPERFAMILY CRAL/TRIO domain 67 230 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03911 Vifa-Chr3 1154360432 1154363288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03911 24 241 Acyl Lipid Metabolism Gene Families AT1G55840 22.553 4.92e-13 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03911 3 1154360432 1154363288 Vifa3g03911 3 1154360432 1154363288 ECH