Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03910 ATGTGTAAGACAATTCAATTACATGGATTTCCATCCAATCTTTCTGCTAAAGAGGTAATGAAATTCTTAGAGCAACATACTGGCTTTCAAACTGTTCTTGCTGCAATGATTGAGAAGCACAAAGATTCCATCACACGTGTTAATGTTCAATTCATAGACAAAAAAAGTGTAGAAACAATCTTAAACTTGGTTACTAAACAACACCTATGTTACAATGACACTGTTGTAAATGCTGAAGTAACAAAATCTGACATTTTACCAAATCCAAAGACTTTTGCTTATAGCATGAATGGTGTTGGAGTGCACTTTGGATGTCAAACATCTAAGACAAAACTTAGTGTACTTTGGGAACATTCAAATGCTTCTGTTAAATTTGGATCCAGATTAGGAAAAATGTATATCTTTTTTAGCTATTTGTCTAAGGATTATAAGCTGCAGATTAGTTCCGAGAGTATATCGCGGATCGAGCTGCATCGTTCGCATTGTCACGCCAAGAAACTTCTCCTTTTCCAGTTACGCAGTGCTCCTCGAATCTACGAAAAATTAGTTTCTGAAATCAAGTATTTTAAGGAAGATCATGACAATCATTGGACTAGAAGTGTAGATTTCACCTCATCATGTGGCATTGGACAATCATCAGCTTTATGTTTTGAGCTTCCACAAAGTGCCGAGGTTCCGAATTTTCGTCCCTTCTATCGAAATTATTATAACTTTGACAATACCTTTGATCTTGTGAAACAACATGGTTTCTCGTCGAATTTGAATTTCGTCCCTATGGTGATTCCACCAGAAGGATTCAACTTGCCATACAAAATTCTTTTCAAAATCAACTCATTAGTCCAACATGGTTGCCTTCCTTTGCAAGCAATTGACACCGATCTTTTTCGTATGGTTGATCCACAAAAAATAAAATTTGAATATATAGAAAGTGCTTTGAATAAGTTACATGTGATGAAAGAATGTTGCTATGAACCTGTTCAATGGTTGGAGGAACAATATCGAAGATACTCGAAAAATAGTTTACTTCTATTATCTAGTACCATTTCACTAGATAATGGATTGGTGTATGTTCATAGAGTACAAGTAACTCCATCCAAAATATATTTTTGTGGTCCCGAAGTTAATCTTTCTAATCGAGTTTTGCGAAACTATCCTGAAGACACGGATAACTTCCTTCGCGTTTCTTTCGTTGATGAGAACATGGATAAACTCCGTTCGTCCGATTTGTTGTCGCGTTCCAATGGTATAGAGATGGACAGAGAAACAAATGTTCATCAGAGGGTACTGTCCACGCTAAAAAACGGCCTAGAAATCGGTGACAAGAAGTTCGAGTTTCTTGCTTTCTCGTCAAGTCAACTACGCGATAATTCTGCGTGGATGTTTGCATCGAGAAAAGGACTAACTGCGAGTGATATAAGAAAATGGATGGGAGATTTTCATGAAATTAAGAATGTGGCGAAATATGCAGCAAGGCTAGGTCAATCATTCAGCTCTTCGAGAGAAACGGTGAGTGTTGGAAGACACGAAATCGAAATCATTTCTGATATAGAATTGACAAGAGGTGAAATCAAATATTGTTTTTCTGACGGAATAGGGAAGATATCGTATGCGTTGGCTCAAGAAGTTGCTACAAAAATTGGCTGCAACGATCGCATTGTCCCATCTGCATTTCAAATCAGATATGGTGGATACAAAGGTGTTGTTGCTATTGATCCTAACTCATCAACTAAACTTTCCTTGAGAAAAAGCATGTGCAAGTTTAAGTCAGAAAACACAAAACTTGATGTCTTGTCATGGAGCAAACACAAGCCATGCTTTCTTAACCGACAAGTAATCGTTCTCTTGTCAACCCTCGGTGTCAAGGATCGAGTCTTCAAAAGGATGCAAAGGGAGGTTGTTAATAAACTCAGAATGATATCAAGAAAACCATTCAATGCACTAGACATGATGTCACAAGGAGAGGTTACAACCATGTTAAGGGAAATGCTTATTTGCGGTTTCCATCCAAAAAATGAACCTTTTCTTTCCATGATTTTGAGAACAATATATGCATCAAAGTTACAAGAATTGCAGCTCAAAACTAGGATATTTGTTAGGAAAGGAAGATCATTGTTAGGGTGTTTGGATGAAACAAGGAGATTAAAATATGGAGAGGTCTTTGTGCAAATATCTCTTCCAAGAAATAAGCAATCAAATGTTAGTTCTAAGAGCATTGGAGCAAAAAATGGTAAATATATTGTTAAAGGGAAGGTAGTTGTGGCCAAGAATCCATGTCTTCATCCAGGAGATGTAAGGATTTTGAGAGCAATTGATGTACCTTCCTTACATCATATGGTTGATTGCGTAGTTTTTCCACAAAAGGGGAGAAGACCACATCCTAATGAGTGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTGTGTTGGGACCCTGCTCTTATTCCTCCTCATCAGGAAAACCCAATGGATCATGTACCATCCAAACTCATGAGTATGGATCATGATGTCACATTACAGGATATAGAGGAACATTTCACTCATTACATTGTGAAAGACACCTTAGGAATCATTGCAAGTGCACACACAGTTTTTGCTGATAAAGAATCCGAAAAGGCGATGAGTCATTCATGCATAGAGCTTGCAAAACTCCACTCGGTCGCGGTTGATTTTGCAAAATCCGGTGTCCCGGCTGAAATACCACAACATCTACAAGTACAACAATATCCAGATTTCATGGAAAGGCAAAACAAACCATCTTATCAATCAAACAGCGTAATCGGAGAGCTTTACCGCGAAGTAAAGAACGTTGCCCAACAAAAAGGCCACAAGAAGTCATTCACTAAAAAAGCAGCAATGAAGCTGTATGATCATGACATGAAAATCGATGGCTTTGAAAAGTACTTAAAGATTGCTTGTGAGTACAAACACATGTATGATTCTAAGCTATTGAACTTAATGGATTACTATGGTATAGAAACAGAAGCTGAAATAATTAGTGGAAACATTTTGAAGATGTCAAAATCTTTCAATGACAGAAAAGATAAAGAAGGAATAAACCATGCTGTGATGTCATTGAGAAACGAAGCTAGAAATTGGTTCAATGAGATGAAAAGTAAATCAAATTCTCAAAGTGGTGATTATGATGATTCTTATGCTATTGCATCTGCATGGTACTATGTAACATATCATTCTAGTTATTGGGGATGTTACAATGAAGGGCTTAATAAGGATCATTTCCTTAGTTTTCCATGGTGTGTTCATGATACTCTTGTTCAGATAAAGAAGGAGAAAGCCAATAGTAGAATTTATGGAATGAGGGTTTGGAGAAGGATCAAAATGTTTCTCATCACATTGATGTTTTGTATCTTATTGTGGATAATAGTGCATTATAAATTCATGTGA 3405 0.3692 MCKTIQLHGFPSNLSAKEVMKFLEQHTGFQTVLAAMIEKHKDSITRVNVQFIDKKSVETILNLVTKQHLCYNDTVVNAEVTKSDILPNPKTFAYSMNGVGVHFGCQTSKTKLSVLWEHSNASVKFGSRLGKMYIFFSYLSKDYKLQISSESISRIELHRSHCHAKKLLLFQLRSAPRIYEKLVSEIKYFKEDHDNHWTRSVDFTSSCGIGQSSALCFELPQSAEVPNFRPFYRNYYNFDNTFDLVKQHGFSSNLNFVPMVIPPEGFNLPYKILFKINSLVQHGCLPLQAIDTDLFRMVDPQKIKFEYIESALNKLHVMKECCYEPVQWLEEQYRRYSKNSLLLLSSTISLDNGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDENMDKLRSSDLLSRSNGIEMDRETNVHQRVLSTLKNGLEIGDKKFEFLAFSSSQLRDNSAWMFASRKGLTASDIRKWMGDFHEIKNVAKYAARLGQSFSSSRETVSVGRHEIEIISDIELTRGEIKYCFSDGIGKISYALAQEVATKIGCNDRIVPSAFQIRYGGYKGVVAIDPNSSTKLSLRKSMCKFKSENTKLDVLSWSKHKPCFLNRQVIVLLSTLGVKDRVFKRMQREVVNKLRMISRKPFNALDMMSQGEVTTMLREMLICGFHPKNEPFLSMILRTIYASKLQELQLKTRIFVRKGRSLLGCLDETRRLKYGEVFVQISLPRNKQSNVSSKSIGAKNGKYIVKGKVVVAKNPCLHPGDVRILRAIDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPALIPPHQENPMDHVPSKLMSMDHDVTLQDIEEHFTHYIVKDTLGIIASAHTVFADKESEKAMSHSCIELAKLHSVAVDFAKSGVPAEIPQHLQVQQYPDFMERQNKPSYQSNSVIGELYREVKNVAQQKGHKKSFTKKAAMKLYDHDMKIDGFEKYLKIACEYKHMYDSKLLNLMDYYGIETEAEIISGNILKMSKSFNDRKDKEGINHAVMSLRNEARNWFNEMKSKSNSQSGDYDDSYAIASAWYYVTYHSSYWGCYNEGLNKDHFLSFPWCVHDTLVQIKKEKANSRIYGMRVWRRIKMFLITLMFCILLWIIVHYKFM 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03910 1134 Pfam RNA dependent RNA polymerase 362 934 IPR007855 GO:0003968
Vifa3g03910 1134 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1098 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03910 Vifa-Chr3 1154332616 1154336478 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03910 3 1154332616 1154336478 Vifa3g03910 3 1154332616 1154336478 ECH