Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03871 ATGAGTACTTCCATTGGAGTTTCAGGTTTGGCTCATTTGTTTGGCATCGTCTCCATCATACTCTTACTTGTTTGGTTGTTGCACTATCGCGAAGGGATCGACTATGATTCCGAAGATGGACTTCGCGTCTTCAATGTGCATCCTTTGATGATGTTGTTAGGTTTTATCTTCCTTGTTGGTGAAGGTGTAATGGCGTTCCAAACGGTACCAAAACAAAGACCTGTGCCAAAGTTTGTTCACATGACATTGCATTTGATAGCTATTGTTCTTGGCGTAGTTGGTCTGTGTGCAGTTTTCAAGTTCCATAATATGCGAAACATTGCCGACGTATATAGCCTTCATTCATGGATTGGCATCGGAACCTTCTGCTTGTTTGGTTTGCAGTGGCTATTTGGTTTTGTAACTTTCTTGTTTCCTGGAGCACAAGGCTCAACGAGAGCAAGAGTGCTTCCATGGCATAGAGCTGGAGGGAGAGTGCTACTTTTTATGGCAATATGTGCTGCAGAGACAGGATTGATGGAGAAGTGTGGTTTCCTAAACCTAAAACCGTATGAGAGAGAAACTAATTTGGTCAACTTTCTAGGCTTATCCTGTTTTTCTCCCATGTCTTCAAATATCCTACAAAGCCATATAGCTTGA 639 0.4225 MSTSIGVSGLAHLFGIVSIILLLVWLLHYREGIDYDSEDGLRVFNVHPLMMLLGFIFLVGEGVMAFQTVPKQRPVPKFVHMTLHLIAIVLGVVGLCAVFKFHNMRNIADVYSLHSWIGIGTFCLFGLQWLFGFVTFLFPGAQGSTRARVLPWHRAGGRVLLFMAICAAETGLMEKCGFLNLKPYERETNLVNFLGLSCFSPMSSNILQSHIA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03871 212 SMART 561_7 46 172 IPR006593 -
Vifa3g03871 212 Pfam Eukaryotic cytochrome b561 46 176 IPR006593 -
Vifa3g03871 212 PANTHER CYTOCHROME B561-RELATED 9 198 IPR043205 GO:0016491
Vifa3g03871 212 ProSiteProfiles Cytochrome b561 domain profile. 10 210 IPR006593 -
Vifa3g03871 212 Gene3D - 2 207 - -
Vifa3g03871 212 CDD Cyt_b561_ACYB-1_like 37 180 - -
Vifa3g03871 212 FunFam Cytochrome b reductase 1 2 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03871 Vifa-Chr3 1142272483 1142273945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03871 10 197 Chloroplast and Mitochondria Gene Families AT1G14730 53.191 1.05e-71 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03871 3 1142272483 1142273945 Vifa3g03871 3 1142272483 1142273945 ECH