Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03868 ATGTCTTCAACATTCATCTCTCGCATTTCACATCTTCAAGTTAACCCATGTCTCTCTTTCAACCCTAAGCAATCTCCTTGCCTTCACCAGCCTCTCATAAGCCACAAACAACTTCCCTCAAATTTGAATTTTGAGGCAAAAAGGGCAAATGGGGTTGTGCTGAAAGCGACTTCAGGTGTGGTGGAAGTCAATTCGAAGAAAGCTGTTTCTGTCGGAAAATCCAATGATCCAATTGTTGTTATTGATAATTATGACAGCTTTACTTATAATCTTTGTCAGTTTTTTTGTGTGGAAAATGTTTGGGTATTGATTATCGGTGTTTTAATGGTGAAATTGTTGGGATTTGAATGGGTTTGCGTTAAACTTGCAATGCTGCTGCATCTGTGTCGTGACATGGCTGCGATGATGAATTGTGGAATTTGCAGGAAATATTTGGGCGAGGTAGGATTTCACTATGAGGTCTATCGAAATGACGAGTTAACAGTGGAGGAGTTGAAAAGAAAAAATCCAAGAGGAATTCTGATTTCACCCGGGCCAGGAACACCTCAAGATTCAGGCATAGCTTTGCAAACAGTTTTGGAACTTGGACCGACTGTACCCGTGTTTGGTGTATGCATGGGATTGCAGTGCATGGGAGAGGCTTTTGGCGGGAAAATTGTCCGTGCTCCTAATGGTGTGATGCATGGAAAAAGTTCGCTGGTTTATTATGACGAGAAAGGAGAGGATGGATTACTTGCTGGACTACCAAATCCTTTCTTGGCTGCAAGATATCACAGCCTTGTGATTGAAAAGGAGAGCTTTCCTCATGAAGAACTTGAGGTAACAGCATGGACTGAAGATGGTCTCATAATGGCTGTTCGGCACAAGAAATATCGGTATATGCAGGGTGTTCAGTTTCATCCAGAGAGCATTATAACTCCTGAAGGCAAGACGATCGTCCGCAACTTTGTGAAGCTGATAGAGAAAAAAGAGGCTAGTACTACTTGA 987 0.4225 MSSTFISRISHLQVNPCLSFNPKQSPCLHQPLISHKQLPSNLNFEAKRANGVVLKATSGVVEVNSKKAVSVGKSNDPIVVIDNYDSFTYNLCQFFCVENVWVLIIGVLMVKLLGFEWVCVKLAMLLHLCRDMAAMMNCGICRKYLGEVGFHYEVYRNDELTVEELKRKNPRGILISPGPGTPQDSGIALQTVLELGPTVPVFGVCMGLQCMGEAFGGKIVRAPNGVMHGKSSLVYYDEKGEDGLLAGLPNPFLAARYHSLVIEKESFPHEELEVTAWTEDGLIMAVRHKKYRYMQGVQFHPESIITPEGKTIVRNFVKLIEKKEASTT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03868 328 PRINTS Glutamine amidotransferase superfamily signature 173 182 - -
Vifa3g03868 328 PRINTS Glutamine amidotransferase superfamily signature 296 309 - -
Vifa3g03868 328 PRINTS Glutamine amidotransferase superfamily signature 200 211 - -
Vifa3g03868 328 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 170 184 - -
Vifa3g03868 328 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 200 216 - -
Vifa3g03868 328 Pfam Glutamine amidotransferase class-I 143 317 IPR017926 -
Vifa3g03868 328 Gene3D - 131 319 IPR029062 -
Vifa3g03868 328 FunFam Anthranilate synthase beta subunit 1 131 319 - -
Vifa3g03868 328 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 143 318 IPR006221 -
Vifa3g03868 328 CDD GATase1_Anthranilate_Synthase 78 317 IPR006221 -
Vifa3g03868 328 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 121 326 - -
Vifa3g03868 328 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 67 324 - -
Vifa3g03868 328 SUPERFAMILY Class I glutamine amidotransferase-like 140 322 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03868 Vifa-Chr3 1140155078 1140157504 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03868 3 1140155078 1140157504 Vifa3g03868 3 1140155078 1140157504 ECH