Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03299 ATGGAATCAGTGAAACCATCAGCAGTAACAACCCCAAGCAAGAAACTAGCTAGAAACTTTGCGAAAGTTCTTCATCTCAGAGCATTTCTGAAGAATGTTACTATATCTGAAACAAATCCAAAAGATGAAACAACTGCAATCAATTGGTCTGAATCATTCAACAAAGTTGATGAAGATGAAGAGCTTCAAGAGCAAAGAGTTGCAACAGAAGCACTTCTCGCGAAGGTTTTCGCTAGCGTTTCGACTGTTAAAGGTGCTTATGCTGAGTTACAGCATTTTCAATCACCTTTTGATCCTGATGGAATTGAAGCTTCTGATAAACTGCTAGTTTCTGAGTTGAAGCATTTGTCTGAGCTAAAGCAGTGTTACTTGAAGAAACAGTTTGATCCTTCACCGGAGAAAGCCATACTTGAAGCTGAATCGAAGGAGACTAAAGGTGTTATAAGAACCTATGAGATTACGGCGAAGAAGTTGGAGTCACAGGTTAGGCTCAAAGATTCTGAGATTATGTTTCTTAAAGAGAAATTAGTGGAAGCTAATAGTCATAACAAGTTAATCGAGAAAAGATTGAATCAAAGTGAATCGTTATCTTCTCTAGATAATAATGTTCACATATCAGGGTTAAGTCCTAGCCATTTTGCTAGCATTCTTCGTCACACGGTTAAATCGATTAGAAACTTTGTGAGGTTAGTTGTTGGTGAAATGAGATCTGCAAAATGGGATATTGATGCTGCTGTCGATGCTATCGAACACAATGTCGTTTACTTCGTAGAAGATCACAAGTGTTTCGCAATCGAATCCTTTGTTTGCAAAGAAATGTTTGACGCGTTTCACTTCCCGAATTTCAATCTTCCGAATGAGTTACTTCCAGATGAGAGAACCAATCAACAAAACTGGTTCTTTCAGAACTTCAACGAGCTGAAATCAACAAAAGTTAAAGACTTTCTTACCGCGAAACCACGTTCATCTTTTGCCAAATTCTGCAAGAACAAATATTTGAGACTGGTTCATCCGAAAATGGAGGTATCGTTTTTCGGAAACATGAATCACAGAAACTTTATAAGCAATGGCGAGTTTCCAAAAAGTGATTTTTTCGCAGCCTTTGCTGAAATGGCGAAAAGGGTTTATCTATTACATTGTTTAGCATTCTCATTTGAAGATCAAGCTGAGATATTTCAAGTTTCAAAAGGGTGTAGATTTTCTGATGTGTACATGGAAAGTGTGAACGATGAAATCTTCATGTGTGCAAATTCAGACAAGACAACAACAATTGTTGAACCAGAAGAAGAACCTGTTGTTGGTTTCACCGTTGTTCCTGGTTTTAGAATTGGTAAAACTTTTTTACAGTGTCTAGTTTACCTCATGCAGAAGAAAAGTTCATAG 1383 0.3745 MESVKPSAVTTPSKKLARNFAKVLHLRAFLKNVTISETNPKDETTAINWSESFNKVDEDEELQEQRVATEALLAKVFASVSTVKGAYAELQHFQSPFDPDGIEASDKLLVSELKHLSELKQCYLKKQFDPSPEKAILEAESKETKGVIRTYEITAKKLESQVRLKDSEIMFLKEKLVEANSHNKLIEKRLNQSESLSSLDNNVHISGLSPSHFASILRHTVKSIRNFVRLVVGEMRSAKWDIDAAVDAIEHNVVYFVEDHKCFAIESFVCKEMFDAFHFPNFNLPNELLPDERTNQQNWFFQNFNELKSTKVKDFLTAKPRSSFAKFCKNKYLRLVHPKMEVSFFGNMNHRNFISNGEFPKSDFFAAFAEMAKRVYLLHCLAFSFEDQAEIFQVSKGCRFSDVYMESVNDEIFMCANSDKTTTIVEPEEEPVVGFTVVPGFRIGKTFLQCLVYLMQKKSS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03299 460 Pfam Plant protein of unknown function (DUF641) 66 189 IPR006943 -
Vifa1g03299 460 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 13 455 IPR040225 GO:0009639|GO:0009959
Vifa1g03299 460 Coils Coil 155 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03299 Vifa-Chr1 513952952 513954334 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03299 1 513952952 513954334 Vifa4g00246 4 48513950 48518443 ECH
Vifa1g03299 1 513952952 513954334 Vifa1g03299 1 513952952 513954334 ECH