Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01692 ATGAAACAAAGCATTGATCTTGAAGTGGAAGCTTATCCAGAATATGAATCTGAAGTTACAAGCCAAGTTGGTTCCAATGTATCAACTCAAGAAGCCTCTTCCAACATCACAAACCCTAACCATGATGATATATCTCTCGACTTAACTCTCAATTTCAAGAACAATGAGATACCAACAACAACAATAGGATTCTCACTCTCAAGCACTTCTGAGAGCAGCAATGAACCTCCATCAGCAACAACTCCAAGAGTTTTCTCTTGCAATTACTGTCAGAGAAAGTTCTTCAGCTCACAAGCTCTTGGTGGACACCAAAATGCACACAAAAGAGAAAGAACAATAGCCAAAAGAGCTACGAGAATGGGAATTTTCTCTGATAGGTATAATGCTAGTTTAGCATCTCTACCTTTGCATGGTTCTTTTAGGTCATTAGGGATAAAAACACACTCTTCAATGCACTATGGTTTCTCAGTACCAACAGCGATTAGGCCTCATCATCATCATCACGAGACGAAGAACAATACGAGACTTGAGCAACAAGGGTGTGTTGGATTTCCGATATTCTTGGAAGATGAGGAGTCGGAGTTGTTGTGGCCTGGTAGTTTCCGAAAGGCGTCGGAGGCGGGTGATGGACAAGAGAATTTCATACTCAATGAGGTGAATCCATGTGTGGATATAGAAAAATCTACACCAGATTTGACATTGAAACTTTGA 711 0.4065 MKQSIDLEVEAYPEYESEVTSQVGSNVSTQEASSNITNPNHDDISLDLTLNFKNNEIPTTTIGFSLSSTSESSNEPPSATTPRVFSCNYCQRKFFSSQALGGHQNAHKRERTIAKRATRMGIFSDRYNASLASLPLHGSFRSLGIKTHSSMHYGFSVPTAIRPHHHHHETKNNTRLEQQGCVGFPIFLEDEESELLWPGSFRKASEAGDGQENFILNEVNPCVDIEKSTPDLTLKL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01692 236 FunFam Zinc finger protein 2 64 131 - -
Vifa1g01692 236 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 19 160 IPR044246 GO:0009788
Vifa1g01692 236 MobiDBLite consensus disorder prediction 18 40 - -
Vifa1g01692 236 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Vifa1g01692 236 MobiDBLite consensus disorder prediction 16 40 - -
Vifa1g01692 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Vifa1g01692 236 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Vifa1g01692 236 Gene3D Classic Zinc Finger 66 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01692 Vifa-Chr1 277218318 277219028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01692 67 236 C2H2 Transcription Factor Family AT1G66140 45.500 1.82e-44 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01692 1 277218318 277219028 Vifa1g01692 1 277218318 277219028 ECH