Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03179 ATGCTCGATGAAGTGGAACCAAAGTGTAGCGTAAAATTCAGCTTAGCTATAGCTATGGGAGATTTCAGTCATTATCATTTACCAGCAACTCAGTGTTCATCTGATATGTTCTCAAGTATATTCAGATCAAATGGGTTCATTCCAGACACCAATTGGAATGAGAAGTTCCACATTGCTGGAGACTTCGTGTGGATTATATGGGATGAAGTTGGAGAAGATAAGTTTGAAAGGGAGAAGGTTCTTCTGGATTTGGAGCAGGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGATAGAGCCAATATATCTAGAGCTCGTCTGCATCAAGAAGTGGCCGAGGCAGAGGCTGAATTTACTCACCTTCTTTTGTCCCTTGGTGAACGATCTCTACCTGGACGGCCGGAGAAAAGAGCAGGTTCACTGAAAGAGCAGCTAGATTCAATCACCCCAGCACTCCAAGAAATGCGGTTGAGGAAAGAAGAGAGGCTAAACCAGTTCCGAGCTGTGCAAGGTCAAATTCAAAAAATTTCTGCAGAAATTGCTGGTAACTCACACAATGAACCTTCAACTATTGTTGTAAATGAGAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGGCTCTACAATGAGAAGAATGAAAGACTTCAGCAAGTGGAGAAATACATAGACATGATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCTGCAATCATCATGGAAGTTCACCCAAGCTTAAATGATTTGTGTGGAATAACAAAAAACATAAGTGACACTATCTTAGATAAACTCAATATCACAGTGGAGTCCCTCTTTGAAGAAAAGAAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCACTTTCAAATCTGTGGAACCTTATGGACACACCATATAGTGAGCGACACCCTTTTTCTCATGTAATCCATCTCTTGTCACTCTCATCAGCAGAAGTAACAGACCCGGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTCAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAGCTGGAGTTGATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGATGAACAATATAATTAACCTCATAAACTCAGGGGAGATTGATCATTCTGATCTCCTCTTGAGCATGGATGAACAGATATCCAGAGCAAAAGAAGAGGCTTCGAGCAGAAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGCTGGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGAGCCCGCATAATGGTCAGCAGAATACCAGCTTTGGTAGATATGCTAATAAAAATGACTGGAAGTTGGGAAGAAGAAAGAAACAAAGTTTTCTTGTATGATCAGGTACCTCTGATGGCTATATTGGAAGAATATAATGTACTACGACGAGAAAAAGAGGAGGATATGAAAAGACAGCAGCCTTGGGAAAAAAAGAGGATTCAAATCCAAGTAGTTGAGCGAGAAAATACTTATACGTCAAGACCCAGCACCAGCAGCAGACGTCTTCCAAGTAGAAGCTTGAATGGAGCTTTAGACAGTTCTGTGATCATGAACAAAAGGCTTTCTATGGGAATCCAACAGCTGCCATCCAACAGCATAAACTCAGGAAATCAAGGCGTGTCCTTCATTAAGGATGGAAGCAATGCCCTAAGGAAAAAGATTTTTGGCGACCCTGCCTTCACCTCTCAAATGCGATGA 1845 0.4206 MLDEVEPKCSVKFSLAIAMGDFSHYHLPATQCSSDMFSSIFRSNGFIPDTNWNEKFHIAGDFVWIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRARLHQEVAEAEAEFTHLLLSLGERSLPGRPEKRAGSLKEQLDSITPALQEMRLRKEERLNQFRAVQGQIQKISAEIAGNSHNEPSTIVVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDMIHSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKKNRLDKLHHLGKALSNLWNLMDTPYSERHPFSHVIHLLSLSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRIPALVDMLIKMTGSWEEERNKVFLYDQVPLMAILEEYNVLRREKEEDMKRQQPWEKKRIQIQVVERENTYTSRPSTSSRRLPSRSLNGALDSSVIMNKRLSMGIQQLPSNSINSGNQGVSFIKDGSNALRKKIFGDPAFTSQMR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03179 614 Gene3D - 408 542 - -
Vian2g03179 614 Coils Coil 337 357 - -
Vian2g03179 614 Coils Coil 89 116 - -
Vian2g03179 614 Coils Coil 195 226 - -
Vian2g03179 614 Pfam Microtubule associated protein (MAP65/ASE1 family) 65 555 - -
Vian2g03179 614 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 66 584 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03179 Vian-Chr2 52256353 52262110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03179 65 508 EF-hand Containing Proteins AT5G62250 39.514 1.52e-90 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03179 2 52256353 52262110 Vian2g03179 2 52256353 52262110 ECH