Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01800 ATGGAGTTCTTGTCCTTCCTCTTCCTTGCCCTTCTCTTCGTTCTCTCTCTCTACTTCGCCAGAGAAAAACCCCACAACAACAAATGCTTCAGACCCTACCCTCTCATTGGAGGATTATTGGATTTCCTCAAAAACCGCCACCGCTTCCTCGAATGGACCACCCAAGTCCTCAATGACTGCCCCACCAACACCGCCGTCATGTCCCACCCCTACGGATTCAACATCGTCGTAACGGCCAATCCCGACAACGTCGAACATATGCTCAAAACCCGATTCGAAAACTACCCGAAGGGTGAACGCTTCATCCACCCCCTCCATGACCTCCTCGGCAACGGAATCTTCAACTCCGACAGTGAACTTTGGAAGGTGCAGCGAAAAGTCGCCAGCTACGAGTTTACCACCAACTCACTCCGTAACTTCATTGTCAACTCCATCACCACCGAACTCCAAACCAGGCTTCTTCCAATTCTCTCAAAAGCCTCCCAGACAAATAGGGTCCTCGATTTGCAGAACCTCCTCGAGCGCTTCTCCTTCGACAACATCTGCAAGCTAGCCTTCAACGTCGACCCCGCCTGTCTCGGCGGTGACTGCACTGCTGGCACCGATTTCATGAGCGCGTTCGAGGATGCAACCAAGCTGATTTCAGAGAGGTTCCTGAGCTTGTCACGTTTCGTGTGGAAAACAAAGAAGCTGTTCAACTTTGGATCAGAAAGGAGGCTCCGAGAATCAATCACCACCGTTCATGAATTCGCTGACTCCATCATACGGTCCAGATTGGAAGCCAAGGAACACACCCGCGACGACGAAGATTTACTTTCGCGTTTCATCAGAACAAAGGAGAGCTCGCCGGAGTTTCTCCGCGACGTTGTGATAAGTTTCATTCTCGCGGGTCGTGACTCGACCTCGTCCGCGCTCACCTGGTTCTTCTGGATTCTTTCATCCAGACCTCACGTGCGGAGAAAAATTCGCGACGAAATCGCTAGGGTTCGGTCGGCCACGGGCGGCGTTGGCCCGTTAGGGCACGAGGAGCTGAGAGAGATGCATTATTTGCATGCGGCGATTTCAGAGTCGATGAGGTTGTACCCTCCCGTGCCGGTTGACACGAAGGAGTGTCTGAACGACGACGTTTTGCCCGATGGAACGAGGGTTGGGAAGGGGTGGCTGCTAACATACCACACGTACGCGATGGGAAGAATGGAGAGCGTGTGGGGAAAAGACTGTACCAAATATAATCCGGAAAGGTGGTTGCAGAACGGCGTGTGCCGAATGGAGAGTCCGTTTCGTTTTCCGGTGTTTCACGCCGGTCCTCGAATGTGTCTGGGAAAAGAAATGGCTTACGTTCAGATGAAGTCCATTGCAGCTTCAGTGGTGGAAAAGTTTGAGATTGAGGCAGCGGATAGAGACACGTGTCCAGCGCATTCGCTTTCTTTGACGTTGAAGATGAAGGGAGGGTTCCCAGTGAGGGTAAGACTAAGGGATGCCTGCTAA 1488 0.5235 MEFLSFLFLALLFVLSLYFAREKPHNNKCFRPYPLIGGLLDFLKNRHRFLEWTTQVLNDCPTNTAVMSHPYGFNIVVTANPDNVEHMLKTRFENYPKGERFIHPLHDLLGNGIFNSDSELWKVQRKVASYEFTTNSLRNFIVNSITTELQTRLLPILSKASQTNRVLDLQNLLERFSFDNICKLAFNVDPACLGGDCTAGTDFMSAFEDATKLISERFLSLSRFVWKTKKLFNFGSERRLRESITTVHEFADSIIRSRLEAKEHTRDDEDLLSRFIRTKESSPEFLRDVVISFILAGRDSTSSALTWFFWILSSRPHVRRKIRDEIARVRSATGGVGPLGHEELREMHYLHAAISESMRLYPPVPVDTKECLNDDVLPDGTRVGKGWLLTYHTYAMGRMESVWGKDCTKYNPERWLQNGVCRMESPFRFPVFHAGPRMCLGKEMAYVQMKSIAASVVEKFEIEAADRDTCPAHSLSLTLKMKGGFPVRVRLRDAC 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01800 495 CDD CYP86A 70 485 - -
Vian2g01800 495 Gene3D Cytochrome P450 16 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01800 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vian2g01800 495 PANTHER CYTOCHROME P450 18 487 - -
Vian2g01800 495 Pfam Cytochrome P450 30 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01800 Vian-Chr2 36353695 36355182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01800 30 492 Cytochrome P450 AT3G56630 58.120 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01800 2 36353695 36355182 Vian2g01800 2 36353695 36355182 ECH
Vian1g04123 1 64246437 64246829 Vian2g01800 2 36353695 36355182 ECH